Isoptericola variabilis: Isova_0082
Help
Entry
Isova_0082 CDS
T01520
Name
(GenBank) Ig domain protein
Organism
iva
Isoptericola variabilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Big_4
CBM_6
Glyco_hydro_39
DUF1833
Ig-like_KY
Motif
Other DBs
NCBI-ProteinID:
AEG42898
UniProt:
F6FQT3
LinkDB
All DBs
Position
89817..93710
Genome browser
AA seq
1297 aa
AA seq
DB search
MRSTRSRRTPRLTAGLTTLALTLGTVGAVTAAPATAAEAPEPYLHYTMEGISGTTLPDVS
GNNLHGTLAGNRSVIEAEGGGAALDLHGGTNGGHVSVPRGALEGATDLTVSAHVRWDGSG
GAWQRIFDLGTNTTRYLFATPSNGDGRLRTAVTTSGGGGETQANGYGPLKAGDWVTLTTT
LDTSAQRVTMYLDGVAVASAPTSVTAGQLLTASAARAGWIGRSMYPDPLFDGAVADFRIY
RAALSAEQVAELVGETPDVVALANETFQLRTLVGAAPNLPAAVRASFTDGYDRDVPVTWD
AVDPAQYAQPGTYTVQGRAAGVTVTANVTVHRGELKVDLATNTGEFQGGASGLLYGLYAD
GMPTDNLVEGMNVRTVATKAQDGAQHPGSDALEVVRQLADTTDGDVYLRVTDYYRGFPYQ
WPGSTPAEKLADYARVLDEQLAMIGTLEPEYRDNLVIEPFNEPEGNMFGTGQWSLNRISW
LNDPTDYFAAWDRTYRTIKEAYPDMRIAGPGTSILYPQVKGFLEHAVEAGTVPDIITWHE
LSHPQNIRDSVERYRGWEAEVFAGTELEGTELPINVNEYAFNYHTSVPGQMIQWMSAIED
SKVEAMIAFWNINGNLSDSAVQANRGNGQWWLYNAYAHMTGHTVEVTPPFPGQNYSLQGV
ATLDEERAVARTILGGADGAAPVELVNVPADVFGGDEVRVFVREIPWTGQLGDSAQPRHL
AELTLPVTDGTVAVEFDGETLPLLEESSAYEVVVTPAGAGQSTTSTPTLWQGSYEAEDAA
HTGSGYSRNGPEGRPQDVGKFYTSGMYNVGGLRTGSNVVLDFEVTVPQDGTYDLSVFANS
LNTYNLVAEQGPTNVFLRVDGEAEQELFLPLGYKWVVWDHTDTTVELTAGTHTISLAARS
LDGSKATKGDALIDRITLSLANPDADTSVYEAELAQLDGGSTVYSAPDGVDAATISGSGA
VQLAEGESATFWVYGARDAEATLGADLLGAGAGTLAVNGRDVLDLARASEVAVHLEGGVN
KVTVTGGAGGLVLDRLTVAAGNDSLPTTEYQAEDAELAGSAAVVDLPLAEGGKAVAGVGG
EPGNDSALTFRVAAEEAGPHAVVVRFSNPEQVDGTHYNPNPVARHADISVNGGEPQRWMF
VPTFHKNNFWERTIVLDLEAGENTISLRSEEATNWDGETYASETWPADYNLRADEAPIVD
RITVSPLSAVSPVAVRAVTECRGKRAFVVVDVTNTSGAATDVAVTALGETRERDTLAAGK
SWRLPFAADAASLEAGEVTVTASGVNTLHAYPEVTCG
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcacacgatcgcggcgcacgccgcggttgacggcggggctgacgaccctcgcc
ctcacgctcggcacggtcggcgcggtcaccgcggcaccggcgaccgccgcagaggcgccc
gagccctacctgcactacacgatggagggcatctcgggcacgacgctgcccgacgtctcc
ggcaacaacctccacggaacgctcgccggcaaccggtccgtcatcgaggcggagggcggc
ggcgcggcgctcgacctgcacggcggcacgaacggcggccacgtgtcggtcccgcggggc
gcgctcgagggcgccaccgacctcacggtctccgcgcacgtccggtgggacggcagcggc
ggggcctggcagcggatcttcgacctcggcaccaacaccacgcgctacctgttcgcgacg
ccgtcgaacggcgacggccggctccgcacggccgtcacgaccagcggcggcggcggcgag
acgcaggcgaacggctacggccccctcaaggcgggcgactgggtcacgctcaccacgacc
ctcgacacgtccgcccagcgcgtgaccatgtacctcgacggcgtcgccgtggcgtcggcg
cccacgtccgtcacggcggggcagctgctcaccgcgagcgccgcgcgcgccggctggatc
gggcgctccatgtacccggacccgctgttcgacggggccgtggcggacttccgcatctac
cgtgcggcattgagcgccgagcaggtcgccgagctcgtgggtgagactcctgacgtggtg
gccctggcgaacgagacgttccagctgcgcacgctcgtcggcgcggccccgaacctcccc
gcggcggtccgcgcgtcgttcaccgacggctacgaccgcgacgtgccggtgacgtgggac
gccgtcgaccccgcgcagtacgcgcagcccggcacgtacacggtgcagggccgggccgcg
ggcgtcacggtgacggcgaacgtcacggtgcaccggggtgagctcaaggtggacctcgcc
acgaacacgggcgagttccagggcggcgcgtcgggcctgctgtacggcctgtacgcggac
ggcatgccgaccgacaacctcgtcgagggcatgaacgtgcgcacggtggcgaccaaggcg
caggacggcgcccagcacccgggctcggacgcgctcgaggtggtccgccagctcgcggac
accaccgacggcgacgtctacctgcgcgtcacggactactaccggggcttcccgtaccag
tggccgggcagcacgccggcggagaagctcgccgactacgcgcgcgtcctcgacgagcag
ctcgcgatgatcggcacgctcgagccggagtaccgggacaacctcgtgatcgagccgttc
aacgagcccgagggcaacatgttcggcaccgggcagtggagcctcaaccgcatctcgtgg
ctcaacgacccgacggactacttcgccgcgtgggaccggacctaccggacgatcaaggag
gcgtacccggacatgcggatcgccggtccgggcacctcgatcctgtacccgcaggtcaag
ggcttcctggagcacgccgtcgaggcgggcaccgtgccggacatcatcacgtggcacgag
ctgtcgcacccgcagaacatccgtgactccgtggagcggtaccgcggctgggaggccgag
gtcttcgcgggaaccgagctcgagggcaccgagctgccgatcaacgtcaacgagtacgcc
ttcaactaccacacgtccgtcccgggccagatgatccagtggatgtccgcgatcgaggac
tccaaggtcgaggcgatgatcgcgttctggaacatcaacgggaacctgtccgactcggcc
gtgcaggccaaccgcggcaacgggcagtggtggctctacaacgcgtacgcgcacatgacg
ggccacacggtcgaggtcacgccgccgttcccggggcagaactactcgctccagggcgtc
gcgacgctcgacgaggagcgggccgtcgcgcgcacgatcctgggcggggccgacggcgcc
gccccggtcgagctcgtcaacgtcccggcggacgtgttcggcggcgacgaggtgcgcgtg
ttcgtccgcgagatcccgtggacgggccagctcggcgactcggcgcagccgcgccacctc
gccgagctcacgctgcccgtgacggacggcacggtcgcggtcgagttcgacggcgagacg
ctgccgctgctcgaggagtcctcggcgtacgaggtcgtggtgacgccggcgggcgccggg
cagtcgacgacgtcgaccccgacgctctggcagggcagctacgaggccgaggacgccgcg
cacaccggctcgggctacagccgcaacggtccggaggggcggccgcaggacgtgggcaag
ttctacacgtcgggcatgtacaacgtgggcggcctgcgcaccggttcgaacgtggtgctc
gacttcgaggtgaccgttccccaggacggcacctacgacctgtcggtgttcgcgaacagc
ctcaacacctacaacctcgtggccgagcagggtccgacgaacgtgttcctgcgcgtcgac
ggcgaggccgagcaggagctgttcctgccgctcggctacaagtgggtggtctgggaccac
accgacacgacggtcgagctcaccgcgggcacgcacacgatctcgctcgcggcgcgcagc
ctcgacgggtcgaaggcgacgaagggtgacgcgctgatcgaccggatcacgctgtcgctg
gccaacccggacgccgacacgtcggtctacgaggcagagctcgcccagctcgacggcggc
agcacggtctactccgcgcccgacggcgtggacgcggccacgatctccggctcgggcgcg
gtccagctcgccgagggcgagtcggccacgttctgggtctacggcgcgcgcgacgccgag
gcgacgctcggcgccgacctgctcggcgccggcgcgggcacgctggcggtcaacggccgt
gacgtgctcgacctcgccagggcgtccgaggtcgccgtgcacctcgagggcggcgtcaac
aaggtcaccgtgaccggtggcgcgggcgggctcgtgctcgaccgcctcaccgtcgcggcc
ggcaacgactcgctaccgacgaccgagtaccaggccgaggacgccgagctggccggctcg
gccgccgtcgtcgacctgcctctcgccgagggcggcaaggccgtcgccggcgtcggcggt
gagccgggcaacgacagcgcgctgacgttccgggtcgccgccgaggaggccggcccgcac
gcggtcgtcgtccgcttctccaacccggagcaggtcgacggcacgcactacaacccgaac
ccggtcgcacggcacgccgacatctcggtcaacggcggcgagccgcagcggtggatgttc
gtccccacgttccacaagaacaacttctgggagcggaccatcgtgctcgacctcgaggcg
ggcgagaacaccatctcgctgcgctccgaggaggcgaccaactgggacggcgagacgtac
gcgtccgagacgtggcccgcggactacaacctgcgggccgacgaggcgcccatcgtcgac
cggatcacggtctcgccgctcagcgcggtgagccccgtcgcggtccgggcggtcacggag
tgccgcggcaagagggcgttcgtcgtcgtcgacgtgaccaacacgtcgggcgcggcgacc
gacgtcgccgtgacggcgctcggcgagacccgcgagcgcgacacgctcgcggccggcaag
tcgtggcggctgccgttcgccgcggacgccgcgtcgctcgaggccggggaggtgacggtc
accgcctccggcgtgaacacgctgcacgcctacccggaggtcacctgcggctga
DBGET
integrated database retrieval system
