Isoptericola variabilis: Isova_0542
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Entry
Isova_0542 CDS
T01520
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
iva
Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_0542
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Isova_0542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
AAA_22
ChlI
AAA
AAA_16
NACHT
Rad51
Isochorismatase
ABC_tran
Lon_C
nSTAND3
TniB
NTPase_1
AAA_14
AAA_5
DUF7125
RsgA_GTPase
AAA_29
AAA_19
AAA_24
PAXNEB
MCM
Motif
Other DBs
NCBI-ProteinID:
AEG43337
UniProt:
F6FUS6
LinkDB
All DBs
Position
complement(582931..584379)
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AA seq
482 aa
AA seq
DB search
MSTSTTRAARATKASRPAYRCTECGWTTAKWAGRCGECQAWGTVTEEGPAAAGPRTVAVT
PTRSPARPIAEIDIDAARAVPTGVAELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLSVAS
NYARGLDGVDARTVLYVTGEESAGQVRLRAERVGALAPSLLLAAETDLATVLGHVEASEP
ALLVVDSVQTIASAEVDGAPGGVSQVREVAAALIAAAKERQVPVLLVGHVTKDGTVAGPR
TLEHLVDVVCQFEGDRHSRLRMVRAVKNRYGPTDEVGCFELSESGIVGLSDPSGLFLSHL
GAGVPGTCVTVTVEGRRPLALEIQSLVAPSPLANPRRTTSGLESSRLAMILAVLHRHGGL
RLADQDVYVSTIGGARVTEPAADLATALAIVSARTGEALPPGTVAVGEVGLAGDIRPVTA
IDRRLSEAARLGFVRAVVPAGTAMTAPAGLQVLEARHIAEAVELAGAAPARGRERPSDRP
AS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacctcgacgacgcgcgccgcgcgcgcgaccaaggcgtcccggcccgcgtaccgc
tgcaccgagtgcggctggacgacggcgaagtgggccggccgctgcggcgagtgccaggcg
tggggcacggtgaccgaggagggtcccgccgcggccggcccgcgcacggtcgccgtgacg
ccgacccgctcgccggcgcggcccatcgcggagatcgacatcgacgccgcccgggcggtg
ccgacgggcgtcgccgagctcgaccgcgtgctgggcggggggctcgtgcccggcgcggtc
gtgctgctcgcgggcgagccgggcgtcggcaagtcgacgctgctgctgtcggtcgcgtcc
aactacgcgcgcggtctcgacggcgtcgacgcccgcacggtcctctacgtcaccggcgag
gagtctgcggggcaggtgcggctgcgggccgagcgcgtcggggcgctcgccccgagcctg
ctgctcgcggccgagaccgacctcgccacggtgctgggccacgtcgaggcctccgagccg
gcgctgctcgtcgtcgactcggtgcagaccatcgcctccgccgaggtggacggcgcgccc
ggcggcgtgagccaggtgcgcgaggtcgcggcggcgctcatcgcggccgccaaggagcgc
caggtgcccgtgctgctcgtcggccacgtgaccaaggacggcacggtcgccgggccgcgc
acgctcgagcacctcgtcgacgtcgtgtgccagttcgagggcgaccggcactcgcgcctg
cgcatggtgcgcgcggtgaagaaccggtacggccccacggacgaggtcggctgcttcgag
ctgtccgagtccgggatcgtcgggctgagcgacccgagcgggctcttcctgtcgcacctc
ggcgcgggcgtgcccggcacgtgcgtgaccgtgacggtcgagggacggcgtccgctcgcg
ctcgagatccagtcgctcgtcgcgccgtcgccgctggcgaacccgcgccgtaccacgagc
ggcctcgagtcgtcgcgcctcgcgatgatcctcgcggtcctgcaccggcacggcggcctg
cggctggccgaccaggacgtgtacgtctcgacgatcggcggcgcgcgcgtcaccgagccc
gccgccgacctcgcgacggcgctcgcgatcgtctcggcgcgcacgggcgaggcgctgccg
cccggcaccgtcgcggtgggcgaggtcgggctggcgggcgacatccggccggtcacggcg
atcgaccgacggctcagcgaggccgcgcggctcgggttcgtgcgcgccgtcgtgcccgcc
gggacggccatgacggcccccgcgggcctccaggtcctcgaggcacggcacatcgccgag
gcggtcgagctggccggggccgctcccgcgcgcggacgcgaacggccgtcggaccgcccc
gcatcgtag
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