Isoptericola variabilis: Isova_0757
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Entry
Isova_0757 CDS
T01520
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
iva
Isoptericola variabilis
Pathway
iva03420
Nucleotide excision repair
iva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Isova_0757
03430 Mismatch repair
Isova_0757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_0757
Enzymes [BR:
iva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Isova_0757
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Isova_0757
MMR (mismatch excision repair)
Other MMR factors
Isova_0757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEG43543
UniProt:
F6FWX1
LinkDB
All DBs
Position
803655..806909
Genome browser
AA seq
1084 aa
AA seq
DB search
MTSLFDSLSLPGLAPTSRDDAARLPSTAPRWDDEPAEGVPDWVRDAVGPQDREEQPRARG
AYAHLDPDALLEGLNPQQRAAVVHHGSPLLIVAGAGSGKTRVLTHRIAHLLATGRARSGE
ILAITFTNKAAAEMRERVEQLVGPSASRMWVSTFHSACVRILRKEAKTLGLRSSFSIYDA
ADSQRLITLVTRELNLDPKKYPARSLANKISDLKNELVDPDTYAQKSGADATEEGWRERA
ARGGGLAAPSVPEFDTVLADVYRRYQARLAQAHALDFDDIIMTTVNLLQAFPNVAEHYRR
RFRHILVDEYQDTNHAQYVLVRELAGHGSDLDPAELTVVGDADQSIYAFRGATIRNIVEF
EADYPDARTVLLEQNYRSTQNILEAANAVISRNPDRKPKRLWTDAGAGAKIVGYVADDEH
AEARFVAEEIDRLGDAEGVRPGDVAVFYRTNAQSRALEEVLIRVGLPYKVVGGTRFYERR
EVKDAIAYLRALANVDDDVNLRRVLNVPKRGLGDRAESLVASFADRERISFGAALERADE
IPGMTTRTLRPLLAFRDMMAELRALVDDGATPATILGEVLDRTGYLAELRASDDPQDASR
VENLAELHAVATEFTELDPEGDLADFLERVSLVADSDQIPDEDVADGAAEEAPKEDAGVV
TLMTLHTAKGLEFPVVFLTGMEDGTFPHMRSLHDDAELAEERRLAYVGLTRARERLYLTR
SAVRSAWGMANEFPPSRFLEEIPEQLWDWRRRESSTQVLRRGGSAWGDRPRSGGATWGER
RGGESRRPATARTETVGGRLGRPERRGRRRRARRRSARRRRGGRRTSRASRWATRSRTTP
TGSAPSSGSRARVPTRWPGSTSAPTARSGCCCGTRRSSSSDGPLFHPVPGRTDRPPGHHA
GAWPPPRRSVVASEPLSCTRGPRSRTPGPGTGPSAAGPTARRCAPSSTAPPSCPRTSATA
WRSRSSASSAGHPRASAPAPGTARTTCPTARSRRWSSCSSARTSSRPRRSATPSGRPPPA
WAWRRWPTWPTTSSACSCPCRRRGATGETRVSRCRSRARSRAVRSGRCGPSRRRSTGARA
SGCR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgacctccctcttcgacagcctctcgctccccggcctcgcaccgacgtcgcgcgacgac
gccgcgcgcctcccgtccacggccccgcgctgggacgacgagccggccgagggcgtcccc
gactgggtgcgggacgccgtcgggccgcaggaccgggaggagcagccgcgggcgcggggc
gcctacgcgcacctcgaccccgacgcgctgctcgaggggctcaacccgcagcagcgggcc
gccgtcgtgcaccacggctcgccgctgctcatcgtcgcgggcgcgggctcgggcaagacg
cgcgtgctcacgcaccgcatcgcgcacctgctcgcgaccggtcgggcgcgctcgggcgag
atcctcgcgatcacgttcaccaacaaggccgcggcggagatgcgcgagcgcgtcgagcag
ctcgtggggccgtcggcgagccgcatgtgggtctcgacgttccactcggcgtgcgtgcgc
atcctgcgcaaggaggccaagaccctgggcctgcggagcagcttctcgatctacgacgcc
gccgactcccagcgcctcatcacgctcgtgacgcgcgagctcaacctcgacccgaagaag
tacccggcgcgctcgctcgcgaacaagatcagcgacctcaagaacgagctcgtcgacccg
gacacctacgcgcagaagtcgggcgcggacgcgaccgaggagggctggcgcgagcgcgcg
gcccgtgggggcgggctcgccgcgccgtcggtgcccgagttcgacacggtgctggccgac
gtctaccgccgctaccaggcacgcctggcccaggcccacgcgctggacttcgacgacatc
atcatgacgacggtgaacctgctccaggcgttccccaacgtcgcggagcactaccgccgc
cggttccgccacatcctcgtcgacgagtaccaggacaccaaccacgcgcagtacgtcctc
gtgcgcgagctcgccggtcacgggagcgacctcgacccggccgagctgaccgtcgtcggc
gacgccgaccagtcgatctacgcgttccgcggcgcgacgatccgcaacatcgtcgagttc
gaggcggactaccccgacgcgcggacggtcctgctcgagcagaactaccgctcgacgcag
aacatcctcgaggcggccaacgccgtcatctcgcgcaacccggaccgcaagcccaagcgg
ctgtggaccgacgcgggcgccggggcgaagatcgtgggctacgtcgccgacgacgagcac
gccgaggcgcggttcgtcgccgaggagatcgaccggctcggcgacgccgagggcgtgcgc
ccgggcgacgtcgcggtcttctaccgcaccaacgcgcagtcgcgtgcgctcgaggaggtc
ctcatccgcgtcgggctgccgtacaaggtcgtgggcggcacccggttctacgagcggcgc
gaggtcaaggacgcgatcgcgtacctgcgcgcgctggccaacgtggacgacgacgtcaac
ctgcgacgcgtgctcaacgtgcccaagcgcgggctcggggaccgcgcggagtcgctcgtg
gcgtcgttcgcggaccgcgagcgcatctcgttcggggcggcgctcgagcgcgcggacgag
atccccggcatgacgacgcgcacgctcaggccgctgctcgcgttccgcgacatgatggcc
gagctgcgcgccctggtcgacgacggcgcgacgcccgcgacgatcctcggcgaggtgctg
gaccgtaccgggtacctggccgagctgcgcgcgtcggacgacccgcaggacgcctcgcgc
gtcgagaacctcgccgagctgcacgcggtggcgacggagttcaccgagctcgaccccgag
ggcgacctcgccgacttcctggagcgggtctcgctcgtcgccgacagcgaccagatcccc
gacgaggacgtcgccgacggcgccgccgaggaggcacccaaggaggacgccggcgtcgtc
acgctcatgacgctgcacaccgccaaggggctcgagttcccggtcgtgttcctcacgggc
atggaggacggcacgttcccccacatgcggtcgctgcacgacgacgccgagctcgccgag
gagcgccggctcgcctacgtgggcctcacccgcgcgcgcgagcggctctacctcacgcgg
tcggcggtgcgctccgcgtggggcatggccaacgagttcccgccgtcgcgcttcctcgag
gagatccccgagcagctgtgggactggcggcggcgcgagtcgtcgacgcaggtgctgcgg
cgcggcggctcggcgtggggcgaccgcccgcgctccggcggcgcgacgtggggcgagcgc
cggggcggcgagtcgcgccggcccgcgaccgcgcgcaccgagacggtcggcgggcggctg
ggccggccggaacggcgggggcgccgtcgtcgggcacggcgacgttcggctcggcgacgc
cgcggcgggcggcggacgtcccgagcctcgaggtgggcgacaaggtcacgcacgacgcct
acgggctcggcaccgtcgtcgggctcgagggcacgggtcccaacacggtggcccggatcg
acttcggctccgacggcacgaagcggctgctgctgcggtactcgccggtcgtcaagctct
gacgggccgctctttcacccggtccccgggcgcacggacaggcccccggggcaccatgct
ggagcatggccaccgccgaggcgcagcgtcgtcgcatccgagccgctctcgtgcacgcgc
ggtccacggtcgaggacgcctggtccgggtaccgggccctcggcggccgggccgaccgcg
cggcggtgcgcgccttcctcgacggctccgccgagctgcccgcgcacgagcgcgaccgcc
tggcgctcgcggtcgagcgcctcgtcggcagggcacccgcgcgcgagcgcacccgcgccc
ggcacggcgcggacgacctgcccgacggcccgctcgcggcgctggtcgagctgctcgtcg
gcacgcacctcgtcccgcccgaggcgatcggcgacgccgtccgggagaccgcctcccgcc
tgggcgtggaggcgctggcctacgtggccgactaccagttccgcgtgctcgtgcccgtgc
cggcgacggggggcgacgggggagacgcgggtgagccggtgcagatcgagggcacggtcg
cgggccgtgcgttccgggcgctgcggaccgtcgaggcgacggtcgacgggcgcccgtgcc
tctgggtgccggtga
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