Isoptericola variabilis: Isova_0815
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Entry
Isova_0815 CDS
T01520
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
iva
Isoptericola variabilis
Pathway
iva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Isova_0815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_0815
Enzymes [BR:
iva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Isova_0815
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Isova_0815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEG43601
UniProt:
F6FX98
LinkDB
All DBs
Position
877983..881396
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AA seq
1137 aa
AA seq
DB search
MLHVHRSERADALVAPLAAVLAPPPSDPFTPDVVAVPTRGVERWLAQRLAHHLGTGPDGE
AGVCANVEFASPARLVADVVARLGGHDAESDPWQAERLTWTVLEVLDDAVGEAWAAPLAR
YLGADDVAEGTAGDARRGRRLGVARRLARLFTSYAAQRPDMVAAWAGESAAGTPDVPTDV
PTDVPTDLAWQVELWRRVRERVGEPGPAERLAGVVRAVVERPDEVDLPERVSVFGPTRLP
EDQLRVLHALGAHRDVHLWLPHPSPALWDRVAAAGPAAARRREQVVHARHPVLASMARDA
TELQVRLARLAVGGEAHAHAHHPAPEPPSTLLGELQRRLRADDAASPPAELDPADRSVEV
HACHGLARQVEVLRDVLAGLLADDPTLEPRDVVVMCPDVEAVAPLVAATFGLADGDGDAA
GAAHPGQALRVRVADRSPRQVNPVLMLLATLLDLADGRVTASEVLDLAASEPVRRRFRLS
DDDLARVRDWAVEAGVHWGEDASRRARFGLPAVRQGTWDTALDRILLGAAMAEEDHRYVS
SALPLDDVDSTDVDLAGRLAELLDRLRTVLADLDGARPRDAWLDALDRAITLLADAAPTE
EWQLSQARRVLADVRVAAAGHDGVLLRLPDVRALLADRLQGRPTRAGFRTGALTVCSLEP
MRAVPHRVVCLLGLDDGAFPRGGAEDGDDVLLRDPCVGERDRRSEDRQLFLDAVSAASER
LVVLYSGADERTGAPRPPAVPVGELLDALDAAARRRDGRPAREHVLVRHPLQPVDERNFA
AGALGRPGPFSFDAHAFAAAVAGRGERVDRVPFLREPLPPAEPEGPGAQVDLDDLVAALE
HPVRWFLRRRLQVSLAGEADDVDDRLPLELEPLGQWPLGERLLGALLDGVEPNRALNVEW
RRGEVPPKELGRATLLAVQEKVLPVAQAAHRYAGEPASGVDVTAELPGGAVVTGTVPGVR
GDVVLRSTFSKLGPKHRLRAWVQLLALVAARPETPWRAVTIGRAPVRAPRAAVSTLRTPT
RAEALRHLGELVALRDAAAREPLPLPVACACAYATSRDGGAEEVQALEAASLEWSQGFER
TDDHHVLCWGAGATLREVAGVPSAAERAWWPEERTRLGVLARRVWQPLLAHEETVTL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgtgcaccgttccgagcgcgcggacgcgctcgtggcgccgctcgccgccgtg
ctcgcgcccccgccgtccgacccgttcacgcccgacgtcgtcgcggtgcccacgcgcggg
gtcgagcggtggctcgcgcagcgcctggcccaccacctcggcacggggcccgacggcgag
gccggcgtctgcgccaacgtcgagttcgcctcgcccgcccggctcgtcgccgacgtcgtc
gcgcgcctcggcgggcacgacgccgagtccgacccctggcaggccgagcggttgacctgg
acggtcctcgaggtgctcgacgacgcggtcggcgaggcctgggccgcgccgctcgcgcgg
tacctcggcgcggacgacgtggccgagggcaccgcgggcgacgcccgccgcgggcgccgg
ctgggcgtcgcgcgccgcctcgcccgcctgttcacctcgtacgccgcgcagcggcccgac
atggtcgccgcgtgggcgggggagtccgccgcggggacgcccgacgtgccgaccgacgtg
ccgaccgacgtgccgaccgacctcgcatggcaggtcgagctctggcggcgcgtgcgcgag
cgcgtcggcgagccgggccccgccgagcggctcgcgggcgtcgtgcgcgccgtcgtggag
cggccggacgaggtggaccttcccgagcgggtctcggtgttcgggcccacgcgcctgccc
gaggatcagctgcgggtgctgcacgcgctcggcgcgcaccgcgacgtccacctgtggctg
ccgcacccctcgcccgcgctgtgggaccgcgtcgcggcggcggggccggcggccgcccgg
cggcgcgagcaggtcgtgcatgcgcgtcacccggtgctcgcctcgatggcgcgcgacgcg
accgagctgcaggtgcggctcgcgcgcctcgccgtcggcggcgaggcgcacgcgcacgcg
caccacccggcgcccgagccgccgtcgaccctgctcggcgagctccagcgccggctgcgt
gccgacgacgccgcgagcccgccggccgagctcgacccggcggaccggtcggtcgaggtg
cacgcgtgccacggcctggcccgccaggtcgaggtgctgcgcgacgtgctcgccgggctg
ctcgccgacgacccgacgctcgagccgcgcgacgtcgtcgtcatgtgccccgacgtcgag
gcggtcgccccgctcgtcgccgcgacgttcgggctcgccgacggcgacggcgacgcggcc
ggcgccgcgcacccgggacaggcgctgcgcgtgcgcgtcgcggaccgctccccgcgccag
gtcaaccccgtgctcatgctgctcgcgacgctgctcgacctcgccgacggccgcgtgacc
gcctcggaggtgctcgacctcgcggcctccgaaccggtgcggcggcgcttccggctgtcc
gacgacgacctcgcccgggtccgcgactgggcggtcgaggccggcgtgcattggggcgag
gacgcgtcgcgccgcgcccggttcgggctgcccgccgtccggcagggcacgtgggacacg
gcgctcgaccgcatcctgctcggcgccgcgatggccgaggaggaccaccgctacgtctcc
tcggcgctgccgctcgacgacgtggacagcaccgacgtcgacctcgcgggccgcctcgcc
gagctgctggaccggctccgcaccgtgctcgccgacctcgacggcgcccgcccccgcgac
gcgtggctcgacgcgctcgaccgcgcgatcacgctgctcgccgacgccgcgcccaccgag
gagtggcagctgtcgcaggcgcggcgcgtgctcgccgacgtgcgcgtcgcggcggccggg
cacgacggcgtcctgctgcggctgcccgacgtgcgggcgctgctggccgaccggctccag
ggccgtccgacgcgcgccgggttccgcaccggcgcgctcacggtctgctcgctcgagccc
atgcgggcggtcccgcaccgcgtcgtgtgcctgctcgggctcgacgacggcgcgttcccg
cgcgggggtgccgaggacggcgacgacgtcctgctgcgcgacccgtgcgtgggcgagcgg
gaccggcgcagcgaggaccgccagctgttcctcgacgccgtctccgccgcgtccgagcgg
ctcgtcgtgctgtacagcggggcggacgagcgcacgggcgcgccccgtccgcccgcggtg
ccggtgggggagctgctggacgcgctcgacgccgcggcgcgccggcgtgacgggcggccc
gcgcgcgagcacgtcctggtccggcacccgctgcagcccgtggacgagcgcaacttcgcc
gcgggcgcgctcggccggcccggtccgttcagcttcgacgcgcacgcgttcgcggccgcc
gtggcgggccgcggcgagcgcgtcgaccgggtgcccttcctgcgcgagccgctgccgccc
gccgagcccgagggaccaggcgcccaggtggacctcgacgacctggtcgcggcgctcgag
cacccggtccggtggttcctgcggcgccgcctgcaggtgtcgctcgcgggcgaggcggac
gacgtcgacgaccgcctgccgctcgagctcgagcccctgggccagtggccgctcggggag
cggctgctcggcgcgctgctcgacggcgtcgagccgaaccgcgcgctcaacgtcgagtgg
cggcgcggggaggtgccgcccaaggagctgggccgcgccacgctgctcgcggtccaggag
aaggtgctgcccgtggcgcaggccgcgcaccggtacgcgggcgagccggcgtcgggcgtc
gacgtcacggccgagctgccgggcggcgccgtggtgaccgggacggtccccggcgtgcgc
ggcgacgtcgtgctgcgctcgacgttctccaagctcgggcccaagcaccgcctgcgcgcg
tgggtccagctgctcgcgctcgtcgccgcgcgccccgagacgccgtggcgcgcggtgacg
atcgggcgggcgcccgtgcgcgcgccgcgcgccgccgtctcgaccctgcgcacgccgacc
cgtgcggaggcgctgcggcacctcggcgagctcgtcgccctgcgggacgccgccgcgcgc
gagccgctgccgctgccggtcgcgtgcgcgtgcgcctacgcgacgagccgcgacggcggt
gcggaggaggtgcaggcgctcgaggccgcgtcgctcgagtggtcgcagggcttcgagcgc
accgacgaccaccacgtcctgtgctggggcgccggcgcgacgctgcgcgaggtcgcgggc
gtcccctcggccgccgagcgggcgtggtggcccgaggagcgcacgcggctcggggtgctc
gcgcggcgcgtgtggcagccgctgctcgcgcacgaggagacggtgacgctgtga
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