Isoptericola variabilis: Isova_0817
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Entry
Isova_0817 CDS
T01520
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
iva
Isoptericola variabilis
Pathway
iva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Isova_0817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_0817
Enzymes [BR:
iva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Isova_0817
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Isova_0817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SH3_13
DUF8012
TraI_hel_assoc_N
AAA_28
AAA_16
NTPase_1
AAA_5
SLFN-g3_helicase
nSTAND3
SRP54
TrwB_AAD_bind
MukB
Motif
Other DBs
NCBI-ProteinID:
AEG43603
UniProt:
F6FXA0
LinkDB
All DBs
Position
884755..886689
Genome browser
AA seq
644 aa
AA seq
DB search
MSAPTVAVPPASSATTAGDPRLALHAGPLLAEHNRAGIVSAADVHVARRLGRLAGEPDER
VLLAVALAVRAVRSGSVCVELDDREALAVPEAEDAAPAGDLRWPEPAEWRAAVEASPLVA
VGPDGPADRPARWVDGRLYLDRYWRHEMVVRREVDARLDGLAPDAAGLDVDRAAAAVRRL
FPAAGDTRQRLAAATALLARVTVLTGGPGTGKTTTVARLLAVLQDVLGDGGPLRVALAAP
TGKAAARLQEAVAEALDGLDAADRERVGSPAATTMHRLLGWRPGSSTRFRHDAGHHLPHD
VVVVDETSMVSLPLMARLLEALRPDARLVLVGDPDQLASVEAGAVLGDLVARPPVADALP
TALARLVPGDVPGGADGDGEDLRRLRNGVVRLVTVHRQRPDSAILPLATAVREGDADEAL
RLLRAGGADVEFVEVAGERPDEDEVAALRADAVGCGGALVAAARAGDAGGALRALERHRL
LLAHRRGPAGVAHWDRLVEEWVAEAVGDDGGHGAWYAGRPLLVTTNDRDTGLYNGDTGVV
VADGRGGLVAAFGKPASPLLVRPHRLPDVETVHAMTVHRGQGSQFDRVTLVLPPATSPLL
TRELLYTAVTRARSHVRILGTEDAVRAAVGRPVRRASGLRRPLG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccccgaccgtggccgtcccgcccgcgtcgtccgcgacgacggcgggcgacccg
cgcctcgccctgcacgccggcccgctgctcgccgagcacaaccgcgccggcatcgtctcg
gccgccgacgtgcacgtggcccggcgcctcggccggctcgccggagagcccgacgagcgc
gtgctgctcgcggtggcgctcgcggtccgggccgtgcgctcggggtcggtgtgcgtggag
ctcgacgaccgcgaggcgctcgccgtgcccgaggccgaggacgccgcgcccgccggggac
ctgcgctggccggagcccgccgagtggcgcgccgcggtcgaggcgagcccgctcgtggcc
gtagggccggacggacccgccgaccgccctgcgcgctgggtcgacggccgcctctacctc
gaccggtactggcgccacgagatggtcgtccggcgcgaggtcgacgcgcgactcgacggc
ctcgcgcccgacgccgccggcctcgacgtcgaccgcgccgccgcggcggtgcgccgcctg
ttcccggccgcgggcgacacgcggcagcggctggcggcggcgaccgcgctgctcgcgcgc
gtcacggtgctcacgggcgggccggggacgggcaagacgacgacggtcgcccggctgctg
gccgtgctccaggacgtgctgggtgacggcggcccgctgcgcgtcgcgctcgcggcgccc
acgggcaaggcggccgcgcggctccaggaggcggtcgccgaggcgctcgacgggctcgac
gccgccgaccgggagcgcgtcgggagcccggccgcgacgaccatgcaccggctgctcggc
tggcggcccggatcctcgacccggttccggcacgacgccgggcaccacctgccgcacgac
gtggtcgtcgtcgacgagacgtccatggtctccctgccgctcatggcgcggctgctcgag
gcgctgcgccccgacgcgcggctcgtgctcgtgggcgaccccgaccagctcgcctcggtc
gaggccggcgcggtgctcggcgacctcgtggcccggccgcccgtcgccgacgcgctcccg
acggcgctcgcgcgcctcgtgccgggcgacgtgcccggcggtgccgacggggacggcgag
gacctgcgccggctgcgcaacggcgtcgtgcgcctggtcacggtgcaccgtcagcgcccc
gacagcgcgatcctgccgctggcgaccgccgtgcgcgagggcgacgccgacgaggcgttg
cggctcctgcgcgccggcggcgcggacgtcgagttcgtcgaggtcgcgggcgagcgcccc
gacgaggacgaggtcgccgccctgcgtgcggacgcggtcgggtgcggcggcgcgctcgtc
gccgcggcacgggcgggcgacgccgggggtgcgttgcgcgcgctcgagcgccaccggcta
cttctggcgcaccgacgcgggccggccggcgtcgcgcactgggaccgtctcgtcgaggag
tgggtcgccgaggcggtcggcgacgacggcgggcacggcgcctggtacgccgggcggccg
ctgctcgtgaccacgaacgaccgcgacacgggcctctacaacggggacaccggcgtcgtc
gtcgccgacggccgcggcggtctcgtggccgcgttcggcaagcccgcgtcgccgctgctc
gtgcggccgcaccggctgcccgacgtcgagaccgtgcacgccatgaccgtgcaccgcggg
cagggcagccagttcgaccgggtgacgctcgtcctgccgcccgcgacgtcgccgctgctc
acccgtgagctgctctacaccgcggtcacccgggcacgctcgcacgtgcggatcctcggc
accgaggacgcggtgcgcgccgccgtcgggcggccggtgcgtcgagcgagcggcctgcgc
cgcccgctcggctga
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