Isoptericola variabilis: Isova_1040
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Entry
Isova_1040 CDS
T01520
Name
(GenBank) ABC transporter related protein
KO
K18230
macrolide transport system ATP-binding/permease protein
Organism
iva
Isoptericola variabilis
Pathway
iva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Isova_1040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iva02000
]
Isova_1040
01504 Antimicrobial resistance genes [BR:
iva01504
]
Isova_1040
Transporters [BR:
iva02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
Isova_1040
Antimicrobial resistance genes [BR:
iva01504
]
Gene variants
Macrolide resistance genes
Transporters
Isova_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_22
AAA_23
SMC_N
AAA
AAA_16
Dynamin_N
AAA_15
NACHT
RsgA_GTPase
RNA_helicase
AAA_28
AAA_18
FtsK_SpoIIIE
AAA_5
AAA_24
AAA_27
MeaB
AAA_33
AAA_7
AAA_30
T2SSE
AAA_25
RedAm-like_C
Motif
Other DBs
NCBI-ProteinID:
AEG43823
UniProt:
F6FQE8
LinkDB
All DBs
Position
1128265..1129905
Genome browser
AA seq
546 aa
AA seq
DB search
MHLVASDLAFSYPGRPVLRHVDVRVSDGVRLGVVGENGTGKSTLLHLLAGDLVPASGEVR
RSGSVALVEQELEVAPGQTVGDLVTGTLAGLRAAAAELEAAAAAFDHETGDLAELTATLA
KVEHLAAWDADRRVDVALARLGAVRDRDRTLASLSVGQRYRVRLACRLAERSDLLLLDEP
TNHLDDSAVEFLTGELVAWRGGVVLVTHDRELLDDVATAIYDLDPSMDGRPVLYGQPGYL
SYRFAKNQALHRWRQRYRAERKRAEQLAERLDASYEGLSDAWRPPKGSQGHRRATRARIH
VKAADRLVQKLEAEAVDVPVPPLELAFPDLPAMSPGWDPGEPLVELRSPRVVAPDGGVRL
DLPGTRVAVPPSGRLLVVGPNGTGKSTFLQALAGRLPLDRGVRSAVAGARVGVVGQEGDP
VGPESRTRSGFDAYAAEALALLGRGELDPEHLVPVAALGLLSEEDLERPLAELSAGQRRR
FELARALLHAPHLLLLDEPTNHLSIDLVDELTRALQVTPAAVVVATHDRRMRADLADWPV
LDLSPR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcgtcgcctccgacctcgccttctcgtaccccggccgtcccgtgctgcgccac
gtcgacgtccgcgtgtccgacggcgtgcggctcggcgtcgtgggggagaacggcacgggc
aagtcgaccctgctgcacctgctcgccggggacctcgtccccgcgtcgggcgaggtccgg
cgctcgggcagcgtcgcgctcgtcgagcaggagctcgaggtcgcgcccggccagaccgtg
ggcgacctcgtcaccggcaccctcgccgggctgcgggccgccgccgcggagctcgaggcc
gcggccgccgcgttcgaccacgagaccggggacctcgccgagctgaccgcgacgctcgcg
aaggtcgagcacctcgccgcgtgggacgccgaccgccgggtcgacgtcgcgctcgcccgt
ctcggcgccgtgcgcgaccgcgaccgcacgctcgcctcgctcagcgtcggccagcggtac
cgggtgcgcctcgcgtgccggctcgccgagcggtccgacctgctgctgctcgacgagccg
accaaccacctcgacgactcggccgtcgagttcctcacgggcgagctcgtcgcctggcgc
ggcggcgtcgtgctcgtcacgcacgaccgcgagctgctcgacgacgtcgccaccgcgatc
tacgacctcgacccgtcgatggacggccggcccgtgctctacggccagcccgggtacctg
tcctaccggttcgccaagaaccaggcgctgcaccggtggcggcagcgctaccgggccgag
cgcaagcgggccgagcagctcgccgaacggctcgacgcctcctacgaggggctgtccgac
gcgtggcgcccgcccaaggggtcgcagggtcaccgccgcgcgacgcgcgcccggatccac
gtcaaggcggccgaccggctcgtgcagaagctcgaggccgaggccgtcgacgtgcccgtg
cccccgctcgagctcgcgttccccgacctgcccgcgatgtcgccgggctgggacccgggc
gaaccgctcgtcgagctgcgctcgccgcgcgtcgtcgcgcccgacggcggggtgcggctc
gacctgcccggcacccgcgtcgcggtaccgccgtcgggccggctgctcgtcgtcgggccc
aacggcacgggcaagtcgacgttcctccaggcgctcgcgggccggctgccgctcgaccgt
ggggtgcggtcggccgtcgcgggggcgcgcgtgggcgtcgtcgggcaggagggcgacccg
gtcgggccagagtcccgcacgcggtctgggttcgacgcgtacgcggccgaggcgctcgcg
ctgctcggccgcggcgagctcgaccccgagcacctcgtgccggtcgcggcgctcgggctg
ctctccgaggaggacctcgagcggccgctcgccgagctgtccgccgggcagcgacgacgg
ttcgagctcgcccgcgcgctgctgcacgccccgcacctgctgctgctcgacgagccgacc
aaccacctgtcgatcgacctcgtcgacgagctcacccgcgcgctgcaggtgacgcccgcc
gccgtcgtcgtcgcgacgcacgaccggcgcatgcgcgccgacctggccgactggcccgtg
ctcgacctctcgccgaggtag
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integrated database retrieval system
