Isoptericola variabilis: Isova_1056
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Entry
Isova_1056 CDS
T01520
Name
(GenBank) ATP-binding cassette protein, ChvD family
KO
K06020
energy-dependent translational throttle protein EttA
Organism
iva
Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iva03016
]
Isova_1056
Transfer RNA biogenesis [BR:
iva03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
Isova_1056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
AAA_23
AAA_22
NB-ARC
AAA_15
AAA_14
AAA
ATPase_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEG43838
UniProt:
F6FQG3
LinkDB
All DBs
Position
1144048..1145730
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AA seq
560 aa
AA seq
DB search
MAEFIYTMYKARKAHGDKVILDDVSLNFLPGAKIGVVGPNGAGKSTILKIMAGLDQPSNG
EARLAPGYTVGILQQEPPLNEEKTVLGNIEEAVAGIKAKVDRFNEISTLMAEPDADFDSL
MAEMGELQEDIDHADAWDLDSQLEQAMDALRCPPPDADVKVLSGGERRRVALCKLLLEKP
DLLLLDEPTNHLDAESVLWLEQHLATYPGAVLAVTHDRYFLDHVAEWICEVDRGRLYPYE
GNYSTYLEKKQARLEVQGKKDAKLAKRLKEELEWVRQSAKGRQAKSKARLQRYEEMAAEA
ERTRKLDFEEIQIPAGPRLGNLVLEATNLQKGFGDRQLIDGLSFTLPRNGIVGVIGPNGV
GKTTLFKTIVGLEPLDGGELKIGDTVKISYVDQSRGGIDPKKTLWEVVSDGLDVIKVGNT
EIPSRAYVASFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL
GSLENALLEFPGCAVVVSHDRWFLDRVATHILAYEGTEENPASWYWFEGNFASYEDNKIQ
RLGAEAARPHRVTYRKLTRD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagttcatctacaccatgtacaaggcgcgcaaggcgcacggcgacaaggtcatc
ctcgacgacgtgtcgctgaacttcctgcctggcgccaagatcggcgtcgtcggcccgaac
ggtgccggcaagtcgaccatcctcaagatcatggccggcctggaccagccgtccaacggc
gaggcgcgcctcgcgccgggctacacggtcggcatcctgcagcaggagccgccgctgaac
gaggagaagacggtcctcggcaacatcgaggaggccgtggccggcatcaaggcgaaggtc
gaccggttcaacgagatctccacgctcatggccgagcccgacgccgacttcgactcgctc
atggccgagatgggcgagctccaggaggacatcgaccacgccgacgcgtgggacctcgac
tcgcagctcgagcaggcgatggacgcgctgcgctgcccgccgccggacgccgacgtgaag
gtcctctccggtggtgagcgccgccgcgtcgcgctgtgcaagctcctcctcgagaagccc
gacctgctgctgctcgacgagccgaccaaccacctggacgccgagtcggtgctgtggctc
gagcagcacctggcgacgtaccccggcgccgtgctggcggtcacgcacgaccgctacttc
ctcgaccacgtcgcggagtggatctgcgaggtcgaccgcggccgcctctacccgtacgag
ggcaactactcgacgtacctcgagaagaagcaggcccgcctcgaggtccagggcaagaag
gacgccaagctcgccaagcgcctcaaggaggagctcgagtgggtgcgccagagcgccaag
ggccgccaggccaagtcgaaggcgcgcctgcagcgctacgaggagatggcggccgaggcc
gagcgcacgcgcaagctcgacttcgaggagatccagatcccggccggcccgcgcctgggc
aacctcgtcctcgaggcgacgaacctccagaagggcttcggcgaccgtcagctcatcgac
ggcctgagcttcacgctgccgcgcaacggcatcgtcggcgtcatcggccccaacggcgtc
ggcaagacgaccctgttcaagacgatcgtgggcctcgagccgctcgacggcggcgagctc
aagatcggcgacacggtcaagatctcctacgtcgaccagagccgtggcggcatcgacccc
aagaagacgctgtgggaggtcgtctccgacggcctcgacgtcatcaaggtcggcaacacc
gagatcccctcgcgggcgtacgtcgcgtcgttcggcttcaagggcccggaccagcagaag
cccgcgggtgtgctgtccggcggtgagcgcaaccgcctcaacctcgcgctcaccctcaag
cagggcggcaacctgctgctcctcgacgagccgaccaacgacctcgacgtcgagaccctg
ggctcgctcgagaacgcgctgctcgagttccccggctgcgccgtcgtcgtctcgcacgac
cgctggttcctcgaccgcgtcgcgacgcacatcctcgcgtacgagggcaccgaggagaac
ccggcgagctggtactggttcgagggcaacttcgcctcctacgaggacaacaagatccag
cgcctgggcgccgaggccgcgcggccgcaccgcgtgacctaccgcaagctcacgcgcgac
tga
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