Isoptericola variabilis: Isova_1147
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Entry
Isova_1147 CDS
T01520
Name
(GenBank) Pectate disaccharide-lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
iva
Isoptericola variabilis
Pathway
iva00040
Pentose and glucuronate interconversions
iva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Isova_1147
Enzymes [BR:
iva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
Isova_1147
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Big_3_5
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
AEG43920
UniProt:
F6FRF9
LinkDB
All DBs
Position
complement(1262028..1264394)
Genome browser
AA seq
788 aa
AA seq
DB search
MNRSARRSSAAIGSLVLAGVAFAPLPAASADATVEDLVWESITFGQSTDLSFSANVLPEK
VGVNHAVPDVPGTVEGEIFMESRGGKIAPGHDGLTFYHVELDPNEHNFVLSADVTLHQLG
PETGANPSGQEGAGLMVRDVNGGARQDPMLPGFEEVPAASNIASTSIFRNGPVALVRTGV
TEPWGSLGSERPVVALVPGSSSSSYQRYLDTPVRMTLERTDTEFVMTAEVDGVEHSHSLV
GADWVQDIDPDTMTVGLYASRNAAVTFSNVELTLSEANTQPRPVAPAPVTPVTFTVTSPQ
HHGATAYPFSARASYDGTIDVAVDGETVVEQATVRAGEDFAATLALATGGNAVTATYTPT
DPAAPSSVPLTRTLSVDVRELAAGDVLLAAPDGTPDGDGSAESPLDLVTAIRYVLPGQAV
ELLGGTYAPSSNVVIAAPYSGTADAPKALRPHDGADVTIDGRGTLSRVIQLDADHWHLSD
LHVTRSASNGVRVSGSNNVLDGLLVNYNGDTGVQLSGPGSDPATWPAHNLVVDSESHDNR
DASDINADGFAAKLGVGPGNVFRGNVAHHNIDDGWDLYNRTNEGPNFPITLEGNISYSNG
TLSDGYNADGTSGSGFKLGGEGLPVAHVVRGNLAFDNNMDGFTDNFNPGRLEVSGNTSVD
NKRFNFIFRINPYFTSDEQGVFRDNLSIRTDSPGTDGRDWVSGVVDATNLFHDGARTAST
NGTFVVAPRDLVSLTAPASYARDDDGAIVWGDFGRPTFRSVLATAGTDGGHVGALAPAER
PGKAGTGR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttccgcccgccggtcgtccgccgcgatcggctcgctcgtcctcgccggggtg
gcgttcgctcccctgccggcagcctcggccgacgccacggtcgaggacctcgtctgggag
tcgatcaccttcggccagtcgaccgacctcagcttctcggccaacgtgctgcccgagaag
gtcggcgtcaaccacgccgtgcccgacgtgccggggacggtcgagggcgagatcttcatg
gagtcgcgcggcggcaagatcgccccgggccacgacggcctgacgttctaccacgtcgag
ctcgacccgaacgagcacaacttcgtcctgtccgccgacgtcacgctgcaccagctcggg
ccggagacgggcgcgaaccccagcggtcaggagggcgcgggcctcatggtgcgcgacgtc
aacggcggcgcccgtcaggacccgatgctgcccggcttcgaggaggtcccggcggcgtcg
aacatcgcctcgaccagcatcttccgcaacggcccggtcgccctcgtgcgcacgggcgtc
accgagccgtggggcagcctcggcagcgagcgcccggtcgtcgccctcgtgccgggctcc
agcagctcgagctaccagcgctacctggacaccccggtccgcatgacgctcgagcgcacc
gacaccgagttcgtcatgaccgccgaggtcgacggcgtcgagcacagccacagcctcgtg
ggcgccgactgggtccaggacatcgacccggacaccatgacggtcgggctgtacgcgtcg
cgcaacgcggcggtcaccttctcgaacgtcgagctcacgctgtcggaggcgaacacgcag
ccgcgtccggtcgcgcccgcgcccgtcacgcccgtgacgttcaccgtcacctcgccgcag
caccacggcgcgaccgcgtacccgttctccgcgcgggcgagctacgacgggacgatcgac
gtcgccgtcgacggcgagaccgtcgtcgagcaggcgaccgtgcgcgcgggcgaggacttc
gccgcgacgctcgccctcgcgacgggcggcaacgccgtcacggcgacgtacacgccgacc
gacccggccgcgccgagcagcgtgcctctcacgcgcacgctctcggtcgacgtgcgcgag
ctcgccgccggcgacgtcctcctcgccgcccccgacggcacgcccgacggcgacggctcc
gcggagagcccgctcgacctcgtcaccgcgatccggtacgtgctgcccggccaggcggtc
gagctgctcggcggcacctacgcgccgtcgtcgaacgtcgtgatcgccgcgccctactcc
ggcacggccgacgcgcccaaggcgctgcgcccccacgacggcgccgacgtgacgatcgac
ggccgcggcacgctctcgcgcgtcatccagctcgacgccgaccactggcacctcagcgac
ctgcacgtgacgaggtcggcgtcgaacggcgtgcgcgtctccggctcgaacaacgtcctc
gacggcctgctggtcaactacaacggcgacacgggcgtccagctgtccggcccgggatcg
gacccggcgacgtggcccgcccacaacctcgtcgtcgacagcgagtcgcacgacaaccgc
gacgcgtccgacatcaacgccgacggcttcgcggccaagctcggcgtcgggccgggcaac
gtgttccgcggcaacgtcgcgcaccacaacatcgacgacggctgggacctgtacaaccgc
acgaacgagggcccgaacttcccgatcacgctcgagggcaacatctcctactcgaacggc
acgctgtccgacggctacaacgccgacgggacgtccggcagcggcttcaagctcggcggc
gagggcctgcccgtggcgcacgtggtgcggggcaacctcgcgttcgacaacaacatggac
ggcttcacggacaacttcaacccgggccgtctcgaggtgtcgggcaacacgtcggtcgac
aacaagcggttcaacttcatcttccggatcaacccctacttcacctcggacgagcagggc
gtgttccgggacaacctgtcgatccgcaccgactcccccggcaccgacggacgggactgg
gtctccggcgtcgtggacgcgacgaacctgttccacgacggcgcgcgcacggccagcacg
aacgggacgttcgtcgtcgcgccgcgcgacctcgtctcgctcaccgccccggcgtcgtac
gcgcgggacgacgacggcgcgatcgtctggggcgacttcggccggccgacgttccggtcc
gtcctggcgacggccggcaccgacggcgggcacgtcggcgccctcgcgccggccgagcgc
ccgggcaaggcgggcaccggccgctga
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