KEGG   Isoptericola variabilis: Isova_1184
Entry
Isova_1184        CDS       T01520                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
iva  Isoptericola variabilis
Pathway
iva02024  Quorum sensing
iva03060  Protein export
iva03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:iva00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Isova_1184
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Isova_1184
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Isova_1184
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:iva02044]
    Isova_1184
Enzymes [BR:iva01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Isova_1184
Secretion system [BR:iva02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Isova_1184
  Eukaryotic Sec-SRP protein
   Isova_1184
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA nSTAND3 Zeta_toxin AAA_30 AAA_31 APS_kinase ArsA_ATPase AAA_22 cobW AAA_16 ParA NACHT AAA_18 AAA_25 AAA_33 TsaE NPHP3_N Thymidylate_kin MobB MeaB
Other DBs
NCBI-ProteinID: AEG43953
UniProt: F6FRV2
LinkDB
Position
1299555..1301174
AA seq 539 aa
MFTSLSDRLTSTFKNLRGRGRLSEADIDATVREIRRALLDADVAVPVVREFTAAVRERAL
SAEVSAALNPAQQVVKIVNDELVEILGGQTRPLRHAKTPPTVIMLAGLQGAGKTTLAGKL
ALALREQGHTPLLVAADLQRPNAVTQLSVVAERAGVPVFAPHPGNQGAETDAVIGDPVAV
ARDGVAEARAKQHDVVIVDTAGRLGVDEVLMRQAGDIRAAIDPDEVLFVIDAMIGQDAVA
TAQAFLEGVDFTGVVLSKLDGDARGGAALSVAKVTGRPIMFASTGEKLTDFEVFHPDRMA
SRILDMGDVLTLIEQAERAFDAEEAARMAAKVEKGEDFTLADFLVQMQQMKKLGSMKKML
GMLPGMAQMREQLESFDEREVDRIQAIIQSMTPAERDNPKIINGSRRARIARGSGQTTTA
VNQLLERFDAAQKMMRQMSKGGGVPGMPGVPGGMPGMPGMPGAGKKSRGKQQPKKKVKGR
SGNPAKRAQQEREALQKALGGGPTAPAGSAFGGGTARDEVDLDGLELPPGLDKLLGGGR
NT seq 1620 nt   +upstreamnt  +downstreamnt
gtgttcacctccctgtccgaccggctcacctcgacgttcaagaacctgcgcggcagggga
cgtctctccgaggcggacatcgacgcgaccgtgcgcgagatccgtcgcgcgctgctcgac
gccgacgtcgccgtgcccgtcgtgcgcgagttcaccgcggcggtgcgcgagcgcgccctc
tcggcggaggtgtcggcggcgctcaaccccgcgcagcaggtcgtcaagatcgtcaacgac
gagctcgtcgagatcctcggcggccagacccgccccctgcggcacgccaagacgccgccg
accgtgatcatgctcgcgggcctccagggcgccggaaagacgacgctcgcgggcaagctc
gcgctcgcgctgcgcgagcaggggcacacgccgctgctcgtcgccgccgacctgcagcgg
cccaacgccgtcacgcagctgtccgtcgtggcggagcgggcgggcgtgccggtcttcgcg
ccgcaccccggcaaccagggcgcggagaccgacgcggtcatcggcgacccggtcgcggtc
gcgcgcgacggcgtcgccgaggcgcgcgccaagcagcacgacgtcgtcatcgtcgacacc
gcgggccgcctcggcgtcgacgaggtcctcatgcgccaggccggcgacatccgcgcggcg
atcgacccggacgaggtcctgttcgtcatcgacgcgatgatcggccaggacgcggtcgcg
accgcgcaggccttcctcgagggcgtggacttcacgggcgtggtcctgtcgaagctcgac
ggcgacgcgcgcggcggtgccgcgctgtcggtcgcgaaggtcacgggccggccgatcatg
ttcgcctcgacgggcgagaagctcaccgacttcgaggtcttccaccccgaccgcatggcg
tcgcgcatcctcgacatgggcgacgtgctcacgctcatcgagcaggccgagcgcgccttc
gacgccgaggaggccgcccggatggcggccaaggtcgagaagggcgaggacttcacgctc
gccgacttcctggtgcagatgcagcagatgaagaagctcggctcgatgaagaagatgctc
gggatgctgcccggcatggcgcagatgcgcgagcagctcgagagcttcgacgagcgcgag
gtcgaccgcatccaggcgatcatccagtcgatgacgccggccgagcgcgacaacccgaag
atcatcaacggctcgcggcgcgcgcgcatcgcgcgcggctcggggcagacgacgacggcg
gtcaaccagctcctcgagcgcttcgacgccgcgcagaagatgatgcgccagatgagcaag
ggcggcggcgtgccggggatgcccggcgtgccgggcgggatgccgggcatgcccgggatg
ccgggcgccggcaagaagtcgcgcggcaagcagcagccgaagaagaaggtcaagggccgc
tccggcaacccggccaagcgcgcgcagcaggagcgcgaggcgctgcagaaggcgctcggc
ggcgggcccacggccccggccgggtcggcgttcggcggcggcaccgcgcgcgacgaggtc
gacctcgacggcctcgagctgccgcccggcctcgacaagctgctcggcggcggccgctga

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