Isoptericola variabilis: Isova_1221
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Entry
Isova_1221 CDS
T01520
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
iva
Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iva03016
]
Isova_1221
Enzymes [BR:
iva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Isova_1221
Transfer RNA biogenesis [BR:
iva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Isova_1221
Prokaryotic type
Isova_1221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AEG43990
UniProt:
F6FRY9
LinkDB
All DBs
Position
1335698..1336654
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AA seq
318 aa
AA seq
DB search
MRSDERPPRRATAPDGLLVVDKPAGWTSHDVVGRCRRLAGTRKVGHAGTLDPMATGVLVV
GVGRATRLLTYVVGADKAYDATIRLGVSTTTDDAEGEVVAASGTGDGVDDADLARAVAAL
TGEIRQVPTTVSAIKVDGRRAYARARAGEEVELAARPVTVHRFDVLEARAAATDDGVPVL
DVDVSVVVSSGTYVRALARDLGAVLGTGGHLTALRRTRVGGYGLDQARTLAELEAQADAD
GVLATLPLADAARALFPVRDLTEAEARALGYGQWLAPSGTAGTVAAVGPDGTLVALLEDA
RRRGEDLARPVLVLAPAG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcagcgacgagcggccgccgcgccgtgcgaccgcgcccgacggcctcctcgtcgtc
gacaagcccgcgggctggacgagccacgacgtcgtcgggcgctgccggcggctcgcgggg
acgcgcaaggtgggccacgcgggcacgctcgaccccatggcgacgggcgtgctcgtcgtc
ggggtcgggcgggccacgcgcctgctcacctacgtcgtgggcgccgacaaggcgtacgac
gcgacgatccggctcggcgtgagcaccacgacggacgacgcggagggcgaggtcgtcgcc
gccagcggcacgggcgacggcgtcgacgacgcggacctcgcccgcgcggtcgccgcgctc
accggggagatccggcaggtgcccaccacggtcagcgcgatcaaggtcgacggccggcgc
gcgtacgcgcgcgcccgcgcgggcgaggaggtcgagctcgccgcgcggcccgtcacggtg
caccgcttcgacgtgctggaggcgcgggccgcggcgaccgacgacggtgtaccggtgctc
gacgtcgacgtgagcgtcgtcgtctcgtccggcacgtacgtgcgcgcgctcgcgcgcgac
ctcggtgccgtgctcggcaccggcgggcacctcaccgcgctgcggcgcacgcgcgtcggg
ggctacggcctcgaccaggcacggacgctcgccgagctcgaggcgcaggccgacgccgac
ggcgtcctggcgaccctgccgctcgccgacgcggcccgggcgctcttccccgtgcgcgac
ctcaccgaggccgaggcgcgcgccctcgggtacgggcagtggctcgcgccgtcgggcacc
gcgggcacggtcgcggccgtcggcccggacggcacgctcgtcgccctgctcgaggacgcg
cgccgcaggggcgaggacctcgcccggccggtgctcgtgctcgccccggcgggctga
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