Isoptericola variabilis: Isova_1252
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Entry
Isova_1252 CDS
T01520
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
iva
Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iva03016
]
Isova_1252
Enzymes [BR:
iva01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Isova_1252
Transfer RNA biogenesis [BR:
iva03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Isova_1252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEG44021
UniProt:
F6FSF4
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All DBs
Position
1370517..1372175
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AA seq
552 aa
AA seq
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MSTTMSTAMPAGVPAPAPVDGPHASAEMPRTYVVRTLGCQMNVHDSEHMAGMLEQAGYTR
ASAQDEAANAADVVVINTCAVRENAATRLYGNLGQLASVKAARPGMQIAVGGCLAQKDRG
EIVAKAPWVDVVFGTHNLDALPVLLERARHNAEAQVEIAESLQVFPSTLPTRRESVYAGW
VSISVGCNNTCTFCIVPHLRGKERDRRPGEILAEVQALVDAGAIEVTLLGQNVNSYGVEF
GDRGAFAKLLRACGTIEGLERVRFTSPHPAAFTDDVIAAMAETPNVMPQLHMPLQSGSDR
VLRAMRRSYRSERFLGILDRVRAALPDAAITTDVIVGFPGETEEDFAETLRVVEASRFSS
AFMFQYSPRPGTPAATMEGQLPKEVVQERFERLVALQERISAEESAAQVGRTLEVLVAEG
SGKKDGATHRLSGRAPDNRLVHLALPDGVAVAGDQPTSLADPRLADAADLDPRLPRPGDV
VTVEVTRAAPHHLIADSALAGGTFAVRRTRSGDAWARRETARLGGGDDHHGHGAPAPAGP
VVLGMPSLRRAR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatgtctaccgccatgcctgccggcgtgcccgcgcccgcgcccgtcgac
ggaccgcacgcgtccgccgagatgccgcgcacctacgtcgtgcgcacgctcggctgccag
atgaacgtccacgactccgagcacatggccggcatgctcgagcaggccggctacacgcgc
gcgtccgcgcaggacgaggcggcgaacgcggcggacgtcgtcgtcatcaacacgtgcgcc
gtgcgcgagaacgccgccacgcggctgtacggcaacctggggcagctcgcgagcgtcaag
gcggcgcggcccggcatgcagatcgcggtgggcggctgcctcgcgcagaaggaccgcggc
gagatcgtggcgaaggcgccgtgggtcgacgtcgtgttcgggacgcacaacctcgacgcg
ctgccggtgctgctcgagcgtgcgcgccacaacgccgaggcccaggtcgagatcgccgag
tcgctgcaggtcttcccgtcgacgctgcccacgcggcgcgagagcgtgtacgcgggctgg
gtgtcgatctcggtcgggtgcaacaacacgtgcacgttctgcatcgtgccccacctgcgc
ggcaaggagcgcgaccgccggccgggcgagatcctcgccgaggtccaggccctggtcgac
gccggcgcgatcgaggtgacgctgctcggccagaacgtcaacagctacggggtcgagttc
ggcgaccgcggcgcgttcgccaagctgctgcgcgcgtgcgggacgatcgagggcctcgag
cgcgtccggttcacctcgccgcacccggccgccttcaccgacgacgtgatcgcggccatg
gccgagaccccgaacgtcatgccgcagctgcacatgccgctgcagtcgggctccgaccgc
gtcctgcgcgcgatgcggcggtcctaccggtccgagcgcttcctcgggatcctcgaccgc
gtgcgcgccgccctgcccgacgccgcgatcaccacggacgtcatcgtcggcttccccggc
gagaccgaggaggacttcgccgagacgctgcgcgtcgtcgaggcctcgcggttcagctcg
gcgttcatgttccagtactcgccgcgacccggcacgccggccgcgacgatggagggccag
ctgcccaaggaggtcgtccaggagcggttcgagcgcctcgtcgcgctccaggagcgcatc
agcgccgaggagtccgcggcgcaggtcggccggacgctcgaggtcctcgtcgccgagggc
tcgggcaagaaggacggcgccacgcaccgcctgtcgggccgcgcgcccgacaaccggctg
gtgcacctcgcgctgcccgacggcgtcgcggtcgcgggcgaccagcccacgtcgctcgcc
gacccccgccttgccgacgccgccgacctggacccgcgcctgccgcgcccgggcgacgtc
gtcacggtcgaggtcacgcgcgccgcaccgcaccacctcatcgccgactcggcgctcgcg
ggcgggacgttcgccgtgcggcgcacccgctcgggcgacgcctgggcgcggcgcgagacc
gcgcgcctgggcggcggggacgaccaccacggccacggcgcgccggcgcccgccggcccc
gtcgtcctcggcatgccgagtcttcgccgcgcgagatag
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