KEGG   Isoptericola variabilis: Isova_1261
Entry
Isova_1261        CDS       T01520                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
iva  Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:iva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iva03400]
    Isova_1261
Enzymes [BR:iva01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Isova_1261
DNA repair and recombination proteins [BR:iva03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Isova_1261
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AEG44030
UniProt: F6FSG3
LinkDB
Position
1378865..1380994
AA seq 709 aa
MNLPDAATDRSAAAPDHRAGDGWADAGTDGVPGVEELLDLTVGALGGGRREGQHRMALAV
ADAVASGEHLLVQAGTGTGKSLAYLVPAVRHAVVDGGRVVVSTATLALQRQVITRDLPLV
AEAVAPRLPREPRVALLKGWHNYLCLHKTGGGYPVDEATLFDLPGATEGAAAEQHPPPAD
GGPGRRGRRGDDGPSLADHVRRLHAWAQETDTGDRDDLVPGVPDRAWRQVSVTALECLGN
RCPMLDECFPERARASAREADVVVTNHAMLGIAASGSPGVLPEHDVVIVDEAHELADRIT
SAATVDLSLTSVEHAARLARRHGGTETSALDDAAQRLGSLLATVPAERFPQGLPDDLRAA
VATVRDAARELLTRLKPEGGGQGPAQPDPGVKMAQSAVLQLFEVAERMAAEDTSADVLWC
SRPPDDAPWAGDGITRLHAAPLAVAGLIRTQLLGEATGVFTSATLALGGSFDPVARSLGL
GAPSEDGSARWRGLDVGSPFDYPRQGILYVARHLPAPGREPTTDAQLDEIAGLIEAAGGR
TLGLFSSRRAANAAAEALRERLDVPVLCQGDDQLPSLVRAFAEDPATCLFGTLSLWQGVD
VPGPSCQLVIVDRIPFPRPDDPIKAARARAVEQAGGNGFMQVAATHAALLLAQGAGRLIR
STDDRGVVAVLDPRLATARYGTFLTRSMPDFWPTTDARLVRAALRRLDT
NT seq 2130 nt   +upstreamnt  +downstreamnt
gtgaacctccccgacgccgccaccgaccggtccgccgccgcacccgaccaccgggccggc
gacggatgggccgacgcgggaaccgacggcgtgcccggcgtcgaggaactgctcgacctc
acggtcggggcgctcggcggcggccggcgtgagggccagcaccgcatggcgctcgcggtc
gccgacgccgtcgcgtcgggcgagcacctgctcgtccaggcgggcacgggcaccggaaag
tccctggcctacctcgtgccggcggtgcgccacgcggtggtggacggcggccgcgtcgtc
gtgtcgaccgcgacgctcgcgctccagcgccaggtcatcacgcgcgacctgccgctcgtg
gccgaggccgtcgccccccggctgccgcgcgagccgcgcgtcgcgctgctcaagggatgg
cacaactacctgtgcctgcacaagacgggcggcggctaccccgtcgacgaggcgaccctg
ttcgacctgcctggtgccaccgagggtgcggcggccgagcagcacccgccgcccgccgac
ggagggcccggtcgccgcggtcgccgcggcgacgacgggccgagcctggccgaccacgtg
cgacggctgcacgcgtgggcgcaggagaccgacacgggcgaccgcgacgacctcgtgccg
ggcgtgcccgaccgcgcctggcgccaggtctcggtcacggcgctcgagtgcctcggcaac
cgctgcccgatgctcgacgagtgcttccccgagcgggcgcgcgcgagcgcgcgcgaggcc
gacgtcgtcgtgacgaaccacgcgatgctcggcatcgcggcgtcgggcagccccggcgtg
ctgcccgagcacgacgtcgtgatcgtcgacgaggcgcacgagctcgccgaccggatcacg
tcggccgcgacggtcgacctgtcgctgacgtcggtcgagcacgcggcccgcctcgcccgg
cggcacggcggcaccgagacgtcggcgctcgacgacgccgcgcagcggctcggctcgctg
ctcgcgaccgtcccggccgagcgcttcccgcagggcctgccggacgacctgcgcgccgcc
gtcgcgaccgtgcgcgacgccgcgcgcgagctgctcacgcggctcaagcccgagggcggc
gggcaggggccggcgcagcccgacccgggcgtgaagatggcgcagtcggcggtgctccag
ctcttcgaggtcgccgagcgcatggcggccgaggacacgagcgccgacgtgctgtggtgc
tcgcgcccgcccgacgacgcgccctgggccggggacgggatcacgcgactgcacgccgcc
ccgctcgcggtcgcgggcctcatccgcacccagctgctcggcgaggcgacgggcgtgttc
acgtccgcgacgctcgccctcggcggctcgttcgacccggtcgcgcgctcgctcggcctc
ggcgccccgtcggaggacggcagcgcccggtggcgcgggctcgacgtcggcagccctttc
gactacccgcgccagggcatcctctacgtcgcgcggcacctgcccgcgcctggccgtgag
cccacgaccgacgcccagctcgacgagatcgcggggctcatcgaggccgccggagggcgg
acgctcggtctcttctcgtcgcgccgggcggcgaacgccgcggccgaggcgctgcgcgag
cggctcgacgtgccggtcctgtgccagggcgacgaccagctcccgagcctcgtgcgcgcg
ttcgccgaggacccggccacgtgcctcttcggcacactgtccctgtggcagggcgtcgac
gtcccgggcccgtcgtgccagctcgtcatcgtcgaccgcatcccgttcccgcggcccgac
gacccgatcaaggcggcgcgtgcccgcgcggtcgagcaggccggcggcaacgggttcatg
caggtcgcggcgacgcacgcggcgctgctgctcgcccagggcgctggcaggctcatccgg
tcgaccgacgaccgcggggtcgtcgcggtgctcgacccgcgcctggccacggcccgctac
ggcacgttcctcacgcggtcgatgccggacttctggccgacgacggacgcgcggctcgtc
cgggctgccctgcgtcgcctcgacacgtag

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