Isoptericola variabilis: Isova_1472
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Entry
Isova_1472 CDS
T01520
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
iva
Isoptericola variabilis
Pathway
iva03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Isova_1472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
iva03011
]
Isova_1472
Ribosome [BR:
iva03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Isova_1472
Bacteria
Isova_1472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
DUF2110
Motif
Other DBs
NCBI-ProteinID:
AEG44233
UniProt:
F6FUA5
LinkDB
All DBs
Position
1602799..1604274
Genome browser
AA seq
491 aa
AA seq
DB search
MTISTTKSAPQVAVNDIGTEDDFLAAVDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKT
EGVIPSRELSIKHDVDPGEVVAVGDVVEALVLQKEDKEGRLILSKKRAQYERAWGTIEKI
KEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYVGKEIEAKIIELDKN
RNNVVLSRRAWLEQTQSEVRSTFLQTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHVSE
LSWKHIDHPSEVVEVGQEVTVEVLDVDFDRERVSLSLKATQEDPWQTFARTHAIGQVVPG
KVTKLVPFGAFVRVEDGIEGLVHISELAVRHVELPEQVVTVGQEVFVKVIDIDLERRRIS
LSLKQANEGVDPESEDFDPALYGMAAEYDENGEYKYPEGFDPETNEWLEGFEAQREAWEA
EYAKAHARWEAHREQVRAALAADADAAAGDVVSSGGGASSYSSAPAQQQEATGTLASDEA
LAALREKLTGN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccatctccaccacgaagtccgccccgcaggtcgccgtgaacgacatcggcaccgag
gacgacttccttgccgccgtcgacgccaccatcaagtacttcaacgatggtgacatcgtc
gaaggcacgatcgtcaaggtcgaccgcgacgaggtcctccttgacatcggctacaagacg
gagggcgtgatcccgtcgcgcgagctctccatcaagcacgacgtggacccgggcgaggtc
gtcgccgtcggcgacgtcgtcgaggctctcgtcctccagaaggaggacaaggagggtcgc
ctgatcctgtccaagaagcgcgcccagtacgagcgcgcctggggcacgatcgagaagatc
aaggaggaggacggcgtcgtcacgggcaccgtcatcgaggtcgtcaagggcggcctcatc
ctcgacatcggcctgcgcggcttcctcccggcctccctcgtggagatgcgccgcgtccgc
gacctcgcgccgtacgtcggcaaggagatcgaggccaagatcatcgagctcgacaagaac
cgcaacaacgtggtgctgtcgcgccgcgcctggctcgagcagacgcagtccgaggtccgc
tccaccttcctgcagacgctgcagaagggccaggtgcgctccggtgtcgtctcgtcgatc
gtcaacttcggtgcgttcgtcgacctgggcggcgtggacggtctcgtgcacgtctccgag
ctgtcctggaagcacatcgaccacccgtccgaggttgtcgaggtgggccaggaggtcacg
gtcgaggtgctcgacgtcgacttcgaccgcgagcgcgtctccctgtcgctgaaggcgacg
caggaggacccgtggcagaccttcgcccgcacgcacgccatcggccaggtcgtgcccggc
aaggtcaccaagcttgtcccgttcggtgcgttcgtgcgcgtcgaggacggcatcgagggc
ctcgtgcacatctccgagctggccgtccgccacgtcgagctgcccgagcaggtcgtcacg
gttggccaggaggtcttcgtcaaggtcatcgacatcgacctcgagcgtcgccgcatctcg
ctgtccctcaagcaggccaacgagggcgtcgaccccgagtcggaggacttcgaccccgcg
ctgtacggcatggcggccgagtacgacgagaacggcgagtacaagtaccccgagggcttc
gaccccgagaccaacgagtggctcgagggcttcgaggcgcagcgggaggcctgggaggcc
gagtacgccaaggcgcacgcgcgttgggaggcgcaccgcgagcaggtgcgtgccgccctc
gcggccgacgccgacgcggcggcgggcgacgtcgtctcctcgggcggcggcgcgtcgtcc
tactcctcggctccggcccagcagcaggaggccaccggcacgctcgcctcggacgaggcg
ctcgccgcgctccgtgagaagctgaccggcaactga
DBGET
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