KEGG   Isoptericola variabilis: Isova_1472
Entry
Isova_1472        CDS       T01520                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K02945  small subunit ribosomal protein S1
Organism
iva  Isoptericola variabilis
Pathway
iva03010  Ribosome
Brite
KEGG Orthology (KO) [BR:iva00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Isova_1472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:iva03011]
    Isova_1472
Ribosome [BR:iva03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Isova_1472
  Bacteria
    Isova_1472
SSDB
Motif
Pfam: S1 S1_RRP5 Spt6_S1 S1_2 RNase_II_C_S1 DUF2110
Other DBs
NCBI-ProteinID: AEG44233
UniProt: F6FUA5
LinkDB
Position
1602799..1604274
AA seq 491 aa
MTISTTKSAPQVAVNDIGTEDDFLAAVDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKT
EGVIPSRELSIKHDVDPGEVVAVGDVVEALVLQKEDKEGRLILSKKRAQYERAWGTIEKI
KEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYVGKEIEAKIIELDKN
RNNVVLSRRAWLEQTQSEVRSTFLQTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHVSE
LSWKHIDHPSEVVEVGQEVTVEVLDVDFDRERVSLSLKATQEDPWQTFARTHAIGQVVPG
KVTKLVPFGAFVRVEDGIEGLVHISELAVRHVELPEQVVTVGQEVFVKVIDIDLERRRIS
LSLKQANEGVDPESEDFDPALYGMAAEYDENGEYKYPEGFDPETNEWLEGFEAQREAWEA
EYAKAHARWEAHREQVRAALAADADAAAGDVVSSGGGASSYSSAPAQQQEATGTLASDEA
LAALREKLTGN
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgaccatctccaccacgaagtccgccccgcaggtcgccgtgaacgacatcggcaccgag
gacgacttccttgccgccgtcgacgccaccatcaagtacttcaacgatggtgacatcgtc
gaaggcacgatcgtcaaggtcgaccgcgacgaggtcctccttgacatcggctacaagacg
gagggcgtgatcccgtcgcgcgagctctccatcaagcacgacgtggacccgggcgaggtc
gtcgccgtcggcgacgtcgtcgaggctctcgtcctccagaaggaggacaaggagggtcgc
ctgatcctgtccaagaagcgcgcccagtacgagcgcgcctggggcacgatcgagaagatc
aaggaggaggacggcgtcgtcacgggcaccgtcatcgaggtcgtcaagggcggcctcatc
ctcgacatcggcctgcgcggcttcctcccggcctccctcgtggagatgcgccgcgtccgc
gacctcgcgccgtacgtcggcaaggagatcgaggccaagatcatcgagctcgacaagaac
cgcaacaacgtggtgctgtcgcgccgcgcctggctcgagcagacgcagtccgaggtccgc
tccaccttcctgcagacgctgcagaagggccaggtgcgctccggtgtcgtctcgtcgatc
gtcaacttcggtgcgttcgtcgacctgggcggcgtggacggtctcgtgcacgtctccgag
ctgtcctggaagcacatcgaccacccgtccgaggttgtcgaggtgggccaggaggtcacg
gtcgaggtgctcgacgtcgacttcgaccgcgagcgcgtctccctgtcgctgaaggcgacg
caggaggacccgtggcagaccttcgcccgcacgcacgccatcggccaggtcgtgcccggc
aaggtcaccaagcttgtcccgttcggtgcgttcgtgcgcgtcgaggacggcatcgagggc
ctcgtgcacatctccgagctggccgtccgccacgtcgagctgcccgagcaggtcgtcacg
gttggccaggaggtcttcgtcaaggtcatcgacatcgacctcgagcgtcgccgcatctcg
ctgtccctcaagcaggccaacgagggcgtcgaccccgagtcggaggacttcgaccccgcg
ctgtacggcatggcggccgagtacgacgagaacggcgagtacaagtaccccgagggcttc
gaccccgagaccaacgagtggctcgagggcttcgaggcgcagcgggaggcctgggaggcc
gagtacgccaaggcgcacgcgcgttgggaggcgcaccgcgagcaggtgcgtgccgccctc
gcggccgacgccgacgcggcggcgggcgacgtcgtctcctcgggcggcggcgcgtcgtcc
tactcctcggctccggcccagcagcaggaggccaccggcacgctcgcctcggacgaggcg
ctcgccgcgctccgtgagaagctgaccggcaactga

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