Isoptericola variabilis: Isova_1557
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Entry
Isova_1557 CDS
T01520
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
iva
Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iva03016
]
Isova_1557
Enzymes [BR:
iva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Isova_1557
Transfer RNA biogenesis [BR:
iva03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Isova_1557
Prokaryotic type
Isova_1557
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEG44311
UniProt:
F6FUX1
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All DBs
Position
1693796..1694785
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AA seq
329 aa
AA seq
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MSARELVVLGTASMVPTRERNHNGYVLRFDDTTILFDPGEGTQRQLTLAGISATDLTRIA
ITHLHGDHSLGLAGVAQRISGDQVPHVVPVCFPASGERWVRHLLDASAFDHHERVVLQPL
TAAPGEAVPVPAVPGQRGGSTAGAPTLTARPLEHRIDALGYRLQEPDGVTLDPALLAAAG
VAPGPDVGRLQREGVLALEDARVVRLEQVSVHRPGQSVAFVMDTRMCDSVGELADGVDLL
VIESTFLHRDADLAERWAHLTARQAAIVAAEAGARHLVLTHFSQRYRVPDELPQAFEREA
REVFDGGLTVARDLDRVPLPPRRRRPARP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcgcgcgagctcgtcgtcctcggcaccgcgagcatggtgcccacccgtgagcgc
aaccacaacgggtacgtgctgcgcttcgacgacaccacgatcctgttcgaccccggcgag
ggcacccagcgccagctcacgctcgcgggcatctcggcgaccgacctgacccggatcgcc
atcacgcacctgcacggcgaccactcgctcggcctggccggggtcgcccagcgcatctcg
ggcgaccaggtgccgcacgtcgtgcccgtgtgcttcccggcgtcgggggagcggtgggtc
cgtcacctgctcgacgccagcgcgttcgaccaccacgagcgcgtggtgctgcagccgctg
accgccgcaccgggcgaggccgtgcccgtgcccgccgtgccgggccagcgcggcggctcg
acggcgggcgccccgacgctgaccgcccgcccgctcgagcaccgcatcgacgcgctcggc
taccggctgcaggagcccgacggcgtcacgctcgacccggcgctgctggccgcggccggg
gtcgcgccggggcccgacgtcgggcggctccagcgcgagggcgtgctcgccctcgaggac
gcgcgcgtcgtgcgcctggagcaggtgagcgtgcaccgtccgggccagtcggtcgcgttc
gtcatggacacccggatgtgcgactccgtcggcgagctcgccgacggagtcgacctgctc
gtcatcgagtcgacgttcctgcaccgcgacgccgacctcgccgagcggtgggcgcacctg
acggcccggcaggccgcgatcgtcgcggccgaggccggcgcgcggcacctcgtgctcacc
cacttctcgcagcgctaccgcgtgcccgacgagctgccgcaggcgttcgagcgcgaggcg
cgcgaggtcttcgacggcgggctcaccgtggcgcgcgacctcgaccgcgtgccgctgccg
ccccgccgccgccgtcccgcccgtccctga
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