Isoptericola variabilis: Isova_1653
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Entry
Isova_1653 CDS
T01520
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
iva
Isoptericola variabilis
Pathway
iva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Isova_1653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_1653
Enzymes [BR:
iva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Isova_1653
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Isova_1653
RecFOR pathway proteins
Isova_1653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
nSTAND3
Mg_chelatase
AAA_14
AAA_22
RNA_helicase
Sigma54_activ_2
TsaE
AAA_3
Rad17
NB-ARC
NTPase_1
AAA_18
Zeta_toxin
IstB_IS21
AAA_33
AAA_19
NACHT
bpMoxR
AAA_28
NPHP3_N
DUF815
DEAD
AAA_25
ABC_tran
Resolvase
AAA_17
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEG44405
UniProt:
F6FVH8
LinkDB
All DBs
Position
complement(1787808..1788899)
Genome browser
AA seq
363 aa
AA seq
DB search
MPEPADHEPYAGERLVTASADDVERAAEAALRPKKLEEFVGQRTVRDQLSLVLQAALARE
ASPDHVLLSGPPGLGKTTLAMIIAAELGTSLRVTSGPAIQHAGDLAAVLSSLEEGEVLFI
DEIHRLARPAEELLYVAMEDFRVDVVVGKGAGASAIPLALPPFTVVGATTRSGLLPAPLR
DRFGFTGHLDFYDPEELERVIVRSAGLLGVQIHHAAAHEIAGRSRGTPRIANRLLRRVRD
WAQVRGDGVLDLRAARAALEVYEVDPIGLDRLDRAVLDALCRRFGGGPVGLSTLAMTVGE
EPDTVETVAEPYLVREGLVARTPRGRVATPAAWEHLGLEPPQGAWAAGLPSSGTLFDAAG
GTG
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagccggccgaccacgagccctacgccggcgagcgcctggtcacggcctccgcc
gacgacgtcgagcgtgccgccgaggcggcgctgcggcccaagaagctcgaggagttcgtc
ggccagcgcaccgtgcgcgaccagctctcgctcgtcctgcaggccgccctcgcccgcgag
gcgtcgcccgaccacgtgctgctgtccggtccgccgggcctgggcaagacgacgctcgcg
atgatcatcgcggccgagctcggcacgtcgctgcgggtcacgagcggcccggcgatccag
cacgcgggcgacctcgccgcggtgctgtcctcgctcgaggagggcgaggtcctgttcatc
gacgagatccaccgcctcgcacggcccgccgaggagctgctctacgtcgcgatggaggac
ttccgcgtcgacgtcgtggtgggcaagggcgccggagcgagcgcgatcccgctcgcgctg
ccgccgttcacggtggtcggcgccacgacgcgctcgggcctgctgcccgccccgctgcgg
gaccgcttcgggttcacggggcacctcgacttctacgaccccgaggagctcgagcgcgtc
atcgtacggtcggcgggcctgctcggcgtgcagatccaccacgcggccgcgcacgagatc
gcgggccgctcgcgcggcacgccgcgcatcgccaaccggctgctgcgccgcgtgcgggac
tgggcgcaggtgcgcggcgacggcgtgctcgacctgcgcgcggcacgcgcagcgctcgag
gtgtacgaggtcgacccgatcgggctcgaccgcctcgaccgcgcggtgctcgacgcgctc
tgccgccggttcgggggcggcccggtgggcctgtcgacgctcgccatgaccgtgggcgag
gagcctgacacggtcgagacggtcgccgagccgtacctggtgcgcgaggggctcgtggcg
cggacgccgcgcggtcgcgtggccacgccggccgcgtgggaacacctgggactcgagccg
ccgcagggcgcctgggctgccggcctgccgtcgtcgggcacgctgttcgacgccgcgggg
gggacgggctga
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