Isoptericola variabilis: Isova_1803
Help
Entry
Isova_1803 CDS
T01520
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
iva
Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iva03032
]
Isova_1803
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_1803
Enzymes [BR:
iva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Isova_1803
DNA replication proteins [BR:
iva03032
]
Prokaryotic type
DNA Topoisomerases
Isova_1803
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Isova_1803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AEG44549
UniProt:
F6FWH5
LinkDB
All DBs
Position
complement(1948537..1950663)
Genome browser
AA seq
708 aa
AA seq
DB search
MTATSESGYTARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDEALGGHAS
TIRVVLHADSSVTVEDDGRGIPVDAEPKTGLSGVEVVFTKLHAGGKFGGGSYTASGGLHG
VGASVVNALSARLDVEVDRGGKTHRMTFHRGEPGIFDDPRTGPTPDAPFTPFVDHSELTV
VGKVPRGRTGTRVRYWADRQIFPKSAVFSYDELVTRARQTTFLVPGLEITVRDERGLPGT
PGENGPHEEVFKHTGGAVDFVEFLAPDTPVTATWRLQGTGHFTETVPVLDSRGHMSPQEV
QRECEVDIALRWGTGYETEVRSFVNIIATPKGGSHLSGFEQGLLKTVRKQVEVNARRLKV
STKDSAERIEKDDVLAGLTAVVTVRLAEPQFEGQTKEVLGTAPVRGIVARVVEKELGALL
TSSKRDDKAQAALLLDKVVAEMRARVTARKQKEISRRKNALETSSLPAKLADCRSDDVRR
SELFIVEGDSALGTAKLARSSDFQALLPIRGKILNVQKASISDMLRNAECAAIIQVIGAG
SGRSFDLEAARYGKIVLMTDADVDGAHIRTLLLTLFYRYMRPLVEAGRVFAAVPPLHRIE
VIGSGKRKNEYIYTYSEAELTATLKRLDKAGRRYKEDIQRYKGLGEMDADQLAETTMDPR
HRTLRRVTVQHAEAAERVFELLMGSDVAPRKEFIVAGAHELDRSKIDA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgactgccacgtccgagtccgggtacaccgcacgccacctgtccgtcctcgagggcctc
gaggcggtgcgcaagcgacccggcatgtacatcgggtcgaccgactcgcgcggactcatg
cactgcctgtgggagatcatcgacaactcggtcgacgaggccctcggcggccacgcctcg
acgatccgcgtggtcctgcacgccgactcctcggtcacggtcgaggacgacggccgcggc
atccccgtcgacgcggagcccaagacgggcctgtcgggcgtcgaggtggtcttcaccaag
ctccacgcgggcggcaagttcggcggcggctcgtacacggcctcgggcggtctgcacggc
gtcggcgcgtcggtcgtcaacgcgctgtccgcacggctcgacgtcgaggtcgaccgcggc
ggcaagacgcaccgcatgacgttccaccgcggcgagccgggcatcttcgacgacccgcgc
acgggcccgacgccggacgccccgttcacgccgttcgtcgaccacagcgagctcacggtc
gtcgggaaggtgccgcgcgggcgcaccggcacccgcgtccgctactgggcggaccggcag
atcttcccgaagtcggccgtcttcagctacgacgagctcgtcacgcgcgcccggcagacg
acgttcctcgtgccgggcctcgagatcacggtccgcgacgagcgcggccttccgggcacg
cccggcgagaacggcccccacgaggaggtcttcaagcacaccgggggagcggtcgacttc
gtcgagttcctcgcgcccgacacccccgtcacggcgacgtggcgcctgcagggcacgggc
cacttcacggagaccgtgccggtgctcgactcgcgcggccacatgtcgccgcaggaggtg
cagcgcgagtgcgaggtcgacatcgcgctgcggtggggcacgggctacgagaccgaggtc
cgctcgttcgtcaacatcatcgcgacgcccaagggcggctcccacctgtcggggttcgag
cagggcctgctcaagacggtgcgcaagcaggtcgaggtcaacgcgcgccggctcaaggtc
tcgaccaaggactcggccgagcgcatcgagaaggacgacgtgctcgcgggcctgaccgcc
gtcgtgacggtccgtctggccgagccgcagttcgaggggcagacgaaggaggtcctcggc
acggcgcccgtgcgcggcatcgtcgcgcgcgtcgtcgagaaggagctcggcgccctgctc
acgtcgtccaagcgtgacgacaaggcgcaggcggcgctgctcctcgacaaggtcgtggcc
gagatgcgcgcgcgggtgaccgcacgcaagcagaaggagatctcgcgccgcaagaacgcg
ctcgagacgtcctcgctgcccgccaagctcgccgactgccgcagcgacgacgtccggcgc
agcgagctgttcatcgtcgagggcgacagcgcgctcggcaccgccaaactcgcccgctcg
agcgacttccaggcgctgctgccgatccgcggcaagatcctcaacgtccagaaggcgtcg
atcagcgacatgctgcgcaacgccgagtgcgcggcgatcatccaggtcatcggcgccggc
tcgggccggtccttcgacctcgaggcggcccgctacggcaagatcgtgctcatgacggac
gccgacgtcgacggcgcccacatccgcaccctgctgctcacgctcttctaccggtacatg
cgcccgctggtcgaggccggccgcgtgttcgccgccgtgccgccgttgcaccgcatcgag
gtgatcggcagcggcaagcgcaagaacgagtacatctacacgtactccgaggccgagctc
accgcgacgctcaagcggctcgacaaggccgggcgccggtacaaggaggacatccagcgg
tacaagggtctcggcgagatggacgccgaccagctcgcggagacgacgatggacccccgt
caccggacgctgcgccgcgtgacggtgcagcacgcggaagccgcggagcgcgtcttcgag
ctgctgatggggtcggacgtcgcgccgcgcaaggagttcatcgtcgcgggcgcgcacgag
ctcgaccggtcgaagatcgacgcctga
DBGET
integrated database retrieval system
