Isoptericola variabilis: Isova_1819
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Entry
Isova_1819 CDS
T01520
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
iva
Isoptericola variabilis
Pathway
iva03030
DNA replication
iva03430
Mismatch repair
iva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Isova_1819
03430 Mismatch repair
Isova_1819
03440 Homologous recombination
Isova_1819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iva03032
]
Isova_1819
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_1819
Enzymes [BR:
iva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Isova_1819
DNA replication proteins [BR:
iva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Isova_1819
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Isova_1819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
LPD22
Motif
Other DBs
NCBI-ProteinID:
AEG44565
UniProt:
F6FWJ1
LinkDB
All DBs
Position
1967662..1969398
Genome browser
AA seq
578 aa
AA seq
DB search
MPSTSPVVVQPSFEELGTPLRDVTFVVVDLETTGGRTEDSGITEIGAVKVRGGEVLGELQ
SLVNPGHPVPAFVARLTGITTAMVATAPDLALVLPSFLEFARGSVLVAHNAPYDVGFLRA
ACERLGYPWPGFRVVDTVPLARRVVTRDEAPNHKLSTLAALFRARTTPQHRALADARATV
DVLHGLLERLAPLGVTHLEDLATAADPVPPEVRRKRHLADGLPDAPGVYLFRGPGDEVLY
VGTSTNIRKRVRTYFTAGEKRRRITEMVRIAHAVTPVVCATPLEAQVRELRLITEHAPRY
NRRSKHPERHAWVRLTDEPYPRLSVVRDVRDGTPHIGPFGSRRAAQDAVDALHDALPLRQ
CTARLPRVARVAGSPCALAGMGRCSAPCTTTQGPDDAYAEVARVAAEALTGDPSPVVRAL
SERIARLAAEQRYEEAGHVTARLRAFVQGAGRAQRLAPLARCAEIVAARATASGGWELVV
VKHGRLAATAVTRPDEDPLPVVDALRATAEAVEPPVPPAPACHPEEAALVLGWLDQPGTR
LVHVSDPWACPVRSAAAHADLAWASGEVRARVATMAAC
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcacgtcccccgtcgtcgtccagccgtccttcgaggagctggggacgccgctg
cgggacgtgacgttcgtcgtcgtcgacctcgagacgacgggcgggcgcaccgaggactcg
ggcatcacggagatcggcgcggtgaaggtccgcggcggcgaggtcctcggcgagctgcag
tcgctcgtcaacccgggccaccccgtgccggcgttcgtcgcccggctcacgggcatcacg
acggcgatggtcgccaccgcccccgacctcgccctcgtgctgccgagcttcctggagttc
gcgcgcgggtccgtgctcgtggcgcacaacgccccgtacgacgtcggcttcctgcgcgcg
gcgtgcgagcgcctcgggtacccgtggccgggcttccgcgtcgtcgacacggtgccgctg
gcgcgccgcgtcgtcacccgcgacgaggcccccaaccacaagctgtccacgctcgcggcg
ctcttccgcgcccgcacgacgccgcagcaccgcgcgctcgccgacgcgcgcgcgacggtc
gacgtgctccacggcctgctcgagcgcctcgcgccgctgggcgtgacgcacctcgaggac
ctcgcgaccgccgccgacccggtgccgcccgaggtgcggcgcaagcgccacctcgccgac
gggctgccggacgccccgggcgtctacctgttccgcggcccgggcgacgaggtcctctac
gtcggcacctcgaccaacatccgcaagcgcgtgcgcacgtacttcacggcgggcgagaag
cgccgccgcatcaccgagatggtgcgcatcgcgcacgccgtcactcccgtggtgtgcgcg
acgccgctcgaggcgcaggtgcgcgagctgcggctcatcaccgagcacgcgccccggtac
aaccgccgctcgaagcacccggagcgccacgcctgggtccggctgaccgacgagccgtac
ccgcggctgtcggtggtccgtgacgtgcgggacgggacgccgcacatcggtccgttcggg
tcgcggcgcgccgcgcaggacgcggtcgacgcgctgcacgacgccctgccgctgcggcag
tgcacggcccggctgccccgcgtcgcgcgggtcgcgggcagcccgtgcgcgctggcgggc
atggggcgctgctcggccccgtgcacgacgacgcagggcccggacgacgcgtacgcggag
gtcgcgcgggtcgcggccgaggcgctcacgggcgacccgtcgcccgtcgtgcgggcgctg
tccgagcgcatcgcgcggctcgccgccgagcagcgctacgaggaggccggccacgtcacg
gcccggctgcgggcgttcgtgcagggggccgggcgggcgcagcgcctcgcgccgctcgcg
cggtgcgccgagatcgtcgccgcccgtgcgacggcgtcgggcggctgggagctcgtcgtc
gtcaagcacgggcggctcgccgcgacggccgtgacccgccccgacgaggacccgctgccc
gtggtggacgccctgcgcgcgacggcggaggcggtcgagccgccggtcccgccggccccg
gcgtgccaccccgaggaggcggcgctcgtcctcggctggctcgaccagcccgggacccgc
ctggtgcacgtgagcgacccgtgggcctgcccggtgcggtccgcggccgcgcacgcggac
ctggcgtgggcgtccggcgaggtcagggcccgcgtggctacgatggccgcatgctga
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