Isoptericola variabilis: Isova_1945
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Entry
Isova_1945 CDS
T01520
Name
(GenBank) ABC-type transporter, integral membrane subunit
KO
K15771
arabinogalactan oligomer / maltooligosaccharide transport system permease protein
Organism
iva
Isoptericola variabilis
Pathway
iva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Isova_1945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iva02000
]
Isova_1945
Transporters [BR:
iva02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
Isova_1945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TM_PBP2_N
BPD_transp_1
MalF_P2
Motif
Other DBs
NCBI-ProteinID:
AEG44682
UniProt:
F6FXF4
LinkDB
All DBs
Position
complement(2094582..2096237)
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AA seq
551 aa
AA seq
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MSAADSNVSAAVVAPSDGGGAASGTTRTPRPRLRLAPSREGFGVGFVVKLVLMGVVDALG
VFALLAAYSEESWGIFAATLAMLVAANWVYFSRRSLPLKYILPGLLFLLVFQVYVVGYTG
YVAFTNYGDGHNSTKEQAVEALLAQNERRVEGSPAAPLTVVESDAGELGFAVVDESGDVR
VGSAEQPLEAAPGATVSDGVATDVPGWTVLDRAQVLERQQEVTTLRVPVSEDPEDGSIRT
QDARTGYVFQPVLEYDAEADTMTDTSTGVVYTPNDEGQFEAPDGTTLAVGWRVSVGFDNF
ATAFGDSRYSEPFVKILAWTFAFALLSVVSTFLLGMFLAIAFNDPRLRGRRIYRTLMILP
YAMPGFLAALLWAGMLNRGYGFVNQVLLGGASIPWLTDPWLAKVSVLLVNLWLGFPYMFL
ICTGALQSLPGDVYEAARIDGAGRWRTWRSITMPLLLVSTAPLLISSFAFNFNNFTLIKM
LTDGGPRFADASVPLGHTDILISMVYNVSGLDGTAPRNYGLASALSIVIFLVVGTISAIA
FRQTRKLEELS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcggactcgaacgtgagcgccgccgtcgtcgccccgagcgatggcggcggc
gccgcatccggcaccacgcgcacgccccgtccccggctccggttggccccgagccgcgag
ggcttcggcgtcgggttcgtcgtcaagctcgtgctcatgggcgtggtcgacgcgctcggg
gtcttcgcgctcctggcggcgtactccgaggagtcgtggggcatcttcgccgcgacgctg
gcgatgctcgtcgcggccaactgggtctacttcagccggcgcagcctgccgctgaagtac
atcctccccggcctgctgttcctgctcgtcttccaggtctacgtcgtcggctacaccggc
tacgtcgccttcaccaactacggcgacgggcacaactcgaccaaggagcaggccgtcgag
gcgctgctcgcacagaacgagcgccgcgtcgagggctcgcccgcggcgccgctgaccgtc
gtcgagagcgacgccggcgagcttggcttcgccgtcgtcgacgagtcgggcgacgtgcgc
gtcgggtcggccgagcagccgctcgaggccgcccccggcgcgacggtgtccgacggcgtc
gcgaccgacgtcccgggctggaccgtgctcgaccgggcgcaggtcctcgagcggcagcag
gaggtcacgacgctgcgcgtgcccgtctcggaggaccccgaggacgggtcgatccgcacg
caggacgcgcgcacggggtacgtgttccagcccgtgctggagtacgacgccgaggccgac
accatgacggacacgtcgaccggcgtcgtgtacacgcccaacgacgaggggcagttcgag
gcgccggacggcacgacgctcgcggtcggctggcgcgtgtcggtcgggttcgacaacttc
gcgacggcgttcggcgactcccgctactccgagccgttcgtcaagatcctcgcatggacg
ttcgcgttcgcgctcctgagcgtggtctcgacgttcctgctcggcatgttcctggcgatc
gcgttcaacgacccgcgcctgcgcggccgccggatctaccggacgctcatgatcctgccg
tacgcgatgccgggcttcctcgcggcgctgctgtgggccggcatgctcaaccgcggctac
gggttcgtcaaccaggtgctgctgggcggggcgagcatcccgtggctcaccgacccgtgg
ctcgcgaaggtgtcggtgctgctcgtcaacctgtggctcggcttcccgtacatgttcctc
atctgcaccggtgcgctgcagtcgctgccgggcgacgtgtacgaggcggcgcggatcgac
ggcgcgggccggtggcgcacgtggcgctcgatcacgatgccgctgctgctcgtctcgacg
gcaccgctgctcatctcgagcttcgcgttcaacttcaacaacttcacgctcatcaagatg
ctgaccgacggcgggccccggttcgccgacgcgtcggtgcccctcgggcacaccgacatc
ctcatctcgatggtctacaacgtgtccggcctcgacggcaccgcgccgcgcaactacggc
ctggcgagcgccctgtcgatcgtgatcttcctcgtggtcggcacgatctccgcgatcgcg
ttccgccagacccgcaagctcgaggagctgagctga
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