Isoptericola variabilis: Isova_1946
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Entry
Isova_1946 CDS
T01520
Name
(GenBank) extracellular solute-binding protein family 1
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
iva
Isoptericola variabilis
Pathway
iva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Isova_1946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iva02000
]
Isova_1946
Transporters [BR:
iva02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
Isova_1946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AEG44683
UniProt:
F6FXF5
LinkDB
All DBs
Position
complement(2096237..2097472)
Genome browser
AA seq
411 aa
AA seq
DB search
MRRSILLAAALTSTLALAACGGGTEPAGDETTEPAEETSAPAASGSLTVWVDETREAAVQ
AAAEDFEAETGTTVELVQKNFEDIRTDFLAQVPTGEGPDITVGAHDWLGELTTNGVVAPI
ELGDKAAEFEEVAVQAFTQDGQVYGLPYAIENIALIRNTALADTAPATFDEMVAAGQEAG
TKYPFLIQTGTEGDPYTYYPFQTSFGAPVFAQNDDGSYRPELTLGGENGEAFAQWLADQG
SAGVLSTDITYDIAVESFKNGESPFIVGGPWMLEQFADLELAIDPIPAPGDQPAQPFVGV
QGFYVSAQSQNALLANDFLVNYLSTEEAQVALFEAGGRPPALTAAADAVSDDPIVAGFRE
VGAEAVPMPSIPEMGSVWAFWGVTEANIISGQAQPAEAWQKMVSDIEGALG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggagcatccttcttgccgccgcgctcacctcgaccctcgcgctcgccgcgtgc
ggcgggggcaccgagccggccggcgacgagaccaccgagccggccgaggagacgagcgcc
cccgcggcgagcggctccctcacggtctgggtcgacgagacccgcgaggccgccgtccag
gccgccgccgaggacttcgaggcggagaccggcaccacggtcgagctcgtccagaagaac
ttcgaggacatccgcaccgacttcctcgcgcaggtcccgacgggcgagggccccgacatc
accgtcggcgcccacgactggctcggcgagctgacgaccaacggcgtcgtcgccccgatc
gagctgggcgacaaggccgccgagttcgaggaggtcgcggtccaggccttcacgcaggac
ggccaggtctacggcctgccctacgcgatcgagaacatcgccctcatccgcaacacggcg
ctcgcggacaccgccccggcgacgttcgacgagatggtcgcggccggccaggaggcgggc
accaagtacccgttcctcatccagacgggcaccgagggcgacccgtacacgtactacccg
ttccagacctcgttcggcgccccggtcttcgcgcagaacgacgacggctcgtaccgtccc
gagctgacgctcggcggcgagaacggcgaggcgttcgcgcagtggctcgccgaccagggc
tccgcgggcgtgctgagcaccgacatcacgtacgacatcgcggtcgagtccttcaagaac
ggcgagtcgccgttcatcgtcggcggcccgtggatgctcgagcagttcgccgacctcgag
ctggcgatcgacccgatcccggcgccgggtgaccagcccgcccagccgttcgtcggcgtc
cagggcttctacgtcagcgcgcagagccagaacgccctgctcgccaacgacttcctcgtc
aactacctgtccaccgaggaggcgcaggtcgcgctgttcgaggccggcggccgcccgccg
gcgctgaccgcggccgccgacgccgtgtcggacgacccgatcgtagcgggcttccgcgag
gtgggcgccgaggccgtcccgatgccgtcgatccccgagatgggctccgtctgggccttc
tggggcgtgaccgaggccaacatcatctcgggccaggcccagccggccgaggcctggcag
aagatggtgtccgacatcgagggcgcgctcggctga
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