Isoptericola variabilis: Isova_1969
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Entry
Isova_1969 CDS
T01520
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
iva
Isoptericola variabilis
Pathway
iva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Isova_1969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_1969
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Isova_1969
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Isova_1969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AEG44706
UniProt:
F6FXH8
LinkDB
All DBs
Position
complement(2122266..2123000)
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AA seq
244 aa
AA seq
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MPLYRDDAIVLRTQKLGEADRIVTFLTREHGKVRAVGRGVRRTSSRFGARLEPFMAVDVQ
LHTGRNLDTVTQVETVGPYAGAICADYGLYTAGAAMLEAADRLVAAEHEPAVQQYWLLAG
GVRALAERAHSPGLVLDSYLLRALAVAGWAPSFTDCARCAEPGPHRNFSVAQGGAVCGRC
RPPGSTSPAPETFELLAALLVGDWEVADGSEARHRREASGLVAAYSQYYLERTLRSLRMI
EREA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctgtaccgagacgacgcgatcgtcctgcgcacccagaagctgggcgaggcggac
cgcatcgtcacgttcctcacgcgcgagcacggcaaggtccgggccgtcggccggggcgtg
cgccgcacgtcgtcgcgcttcggggcgcgtctcgagccgttcatggccgtggacgtgcag
ctgcacacgggccgcaacctcgacacggtgacgcaggtcgagacggtcggcccgtacgcg
ggcgcgatctgcgccgactacgggctctacacggcgggcgccgcgatgctcgaggcggcc
gaccgcctcgtggcggccgagcacgagcccgccgtccagcagtactggctgctcgcgggc
ggcgtgcgggcgctcgccgagcgggcgcactcgccgggcctcgtgctcgactcctacctg
ctgcgcgcgctcgccgtcgccggctgggcgccgtcgttcacggactgcgcccggtgcgcg
gagccgggcccgcatcgcaacttctccgtcgcgcagggcggtgcggtgtgcggccgctgc
cgcccgccgggttcgacgtcgcccgccccggagactttcgagctgctcgccgccctgctc
gtgggcgactgggaggtcgccgacgggtcggaggcgcgccaccgccgggaggcctcgggg
ctcgtcgcggcgtactcgcagtactacctcgagcgcacgctgcgctccctgcggatgatc
gagagagaggcctga
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