Isoptericola variabilis: Isova_2595
Help
Entry
Isova_2595 CDS
T01520
Name
(GenBank) helicase domain-containing protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
iva
Isoptericola variabilis
Pathway
iva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Isova_2595
09124 Replication and repair
03420 Nucleotide excision repair
Isova_2595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iva03021
]
Isova_2595
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_2595
Enzymes [BR:
iva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Isova_2595
Transcription machinery [BR:
iva03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Isova_2595
DNA repair and recombination proteins [BR:
iva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Isova_2595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEG45298
UniProt:
F6FTD4
LinkDB
All DBs
Position
2839805..2841484
Genome browser
AA seq
559 aa
AA seq
DB search
MTDGPLIVQSDKSILLEVDHPRADDARRAIAPFAELERAPEHVHTYRLTNLGLWNARAAG
HDAEQVVDTLLEYSRYPVPHALLVDVAETMARYGRLRLVSHPVHGLVLEATDKAVLAEVL
KSKRTTGMVGERLDDETVVVHPSERGHLKQALVKLGWPAEDLAGYVDGEKHPIALAPVTV
PRTPDEQPKPWEMRPYQAQAVDGFWHGGSGVVVLPCGAGKTIVGAGAMAKSGTTTLILVT
NTVSARQWRDELVRRTTLTEDEIGEYSGARKEIKPVTIATYQVLTTKRKGVYSHLELLDA
RDWGLIVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRYDAPW
KDIETQGYIAPADCVEVRLTLPEHERMVYATAEPEDKYRLAACAPGKNRVVERIVASHPD
DQVLVIGQYLDQLEELSEHLDAPLITGATTVRERQRLFQAFRSGEISRLVVSKVANFSID
LPEASVAIQVSGSFGSRQEEAQRLGRIMRPKADGRTAHFYAVVARDTVDQEFAAHRQRFL
AEQGYAYRIVDAEDLDTVV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggcccgctcatcgtccagagcgacaagtcgatcctgctcgaggtcgaccac
ccgcgcgccgacgacgcgcggcgcgccatcgcgccgttcgcggagctcgagcgcgcgccc
gagcacgtgcacacctaccgcctgacgaacctcggcctgtggaacgcgcgcgccgcgggg
cacgacgcggagcaggtcgtcgacacgctcctcgagtactcgcggtacccggtgccgcac
gcgctgctcgtggacgtcgccgagacgatggcgcgctacggccggctgcgcctcgtgtcc
cacccggtccacgggctcgtgctcgaggccaccgacaaagccgtcctcgccgaggtgctc
aagtccaagcggaccacggggatggtgggcgaacggctcgacgacgagacggtggtcgtc
caccccagcgagcggggccacctcaagcaggcgctggtcaagctcggctggccggccgag
gacctcgcgggctacgtcgacggcgagaagcacccgatcgcgctcgcgccggtcacggtc
ccgcggaccccggacgagcagccgaagccgtgggagatgcggccctaccaggcccaggcc
gtcgacgggttctggcacggcggctccggcgtcgtcgtcctgccgtgcggcgcgggcaag
acgatcgtcggcgcgggcgcgatggcgaagtcgggcacgacgacgctcatcctcgtgacc
aacacggtcagcgcccggcagtggcgcgacgagctcgtgcgccgcacgacgctgaccgag
gacgagatcggcgagtactcgggcgcccgcaaggagatcaagcccgtcacgatcgcgacc
taccaggtgctcacgaccaagcggaagggcgtctacagccacctcgagctgctcgacgcg
cgcgactggggcctcatcgtctacgacgaggtgcacctgctgcccgcgccgatcttccgc
atgacggcggacctgcaggcccggcgccggctcgggctcaccgccacgctggtgcgcgag
gacggccgcgaggacgaggtgttctcgctcatcgggcccaagcgctacgacgccccgtgg
aaggacatcgagacgcagggctacatcgcgcccgccgactgcgtcgaggtccgcctcacg
ctgcccgagcacgagcgcatggtctacgcgacggccgagcccgaggacaagtaccgcctc
gcggcgtgcgcgccgggcaagaaccgcgtcgtcgagcggatcgtcgcgtcgcaccccgac
gaccaggtgctcgtcatcgggcagtacctcgaccagctcgaggagctgtccgagcacctc
gacgcgccgctcatcacgggcgcgacgacggtccgcgagcgccagcgcctgttccaggcg
ttccgctcgggcgagatctcgcgcctcgtcgtgtcgaaggtcgcgaacttctcgatcgac
ctccccgaggcgtccgtcgcgatccaggtgtccgggtcgttcgggtcgcggcaggaggag
gcccagcgcctcgggcgcatcatgcggcccaaggccgacggccgcaccgcgcacttctac
gcggtcgtcgcgcgcgacaccgtggaccaggagttcgccgcgcaccggcagcggttcctc
gccgagcaggggtacgcgtaccggatcgtcgacgccgaggacctcgacacggtcgtctga
DBGET
integrated database retrieval system
