Isoptericola variabilis: Isova_2610
Help
Entry
Isova_2610 CDS
T01520
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
iva
Isoptericola variabilis
Pathway
iva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Isova_2610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iva03019
]
Isova_2610
03110 Chaperones and folding catalysts [BR:
iva03110
]
Isova_2610
03029 Mitochondrial biogenesis [BR:
iva03029
]
Isova_2610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iva04147
]
Isova_2610
Enzymes [BR:
iva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Isova_2610
Messenger RNA biogenesis [BR:
iva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Isova_2610
Chaperones and folding catalysts [BR:
iva03110
]
Heat shock proteins
HSP60 / Chaperonin
Isova_2610
Mitochondrial biogenesis [BR:
iva03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Isova_2610
Exosome [BR:
iva04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Isova_2610
Exosomal proteins of other body fluids (saliva and urine)
Isova_2610
Exosomal proteins of breast cancer cells
Isova_2610
Exosomal proteins of colorectal cancer cells
Isova_2610
Exosomal proteins of bladder cancer cells
Isova_2610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEG45313
UniProt:
F6FTE9
LinkDB
All DBs
Position
complement(2855027..2856655)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKIIAFDEEARRSMERGLNKLADTVKVTLGPKGRNVVLDKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRVVAAGANPIAVKRGIE
KAVEAVTEQLLNSAKEVETKEEIAATAAISAGDPAIGELIAEALDKVGKEGVITVEESNT
FGLELELTEGMRFDKGFLARYFETDPERQEAVLEDPYVLIVESKISNVKDLLPILDQVMK
AGRSLLIIAEDVEGEALATLVLNKIRGTFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIT
ETVGLKLENATLDLLGQARKVVVTKDETTIVEGAGDAELIAGRVNQIRSEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GAAAFEKLELDGDEAIGAQIVAAAVSAPLKQIAINAGLEGGVVAERVKGLPAGQGLNAAT
GEYEDLLAAGVNDPVKVTRSALQNAASIAALFLTTEAVVADKPEPPAGGGGHGDGGMGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgatgaggaagctcgtcggagcatggagcgcgggctgaac
aagctcgcggacaccgtgaaggtcacgctcggccccaagggccgcaacgtggtgctcgac
aagaagtggggcgcccccacgatcaccaacgacggtgtctcgatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggtgccgagctcgtcaaggaggtcgcgaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggccctcgtcaag
gagggtctgcgtgtcgtcgccgccggcgccaacccgatcgccgtcaagcgcggcatcgag
aaggccgtcgaggcggtcaccgagcagctcctgaactccgccaaggaggtcgagaccaag
gaggagatcgctgccacggccgccatctccgccggcgaccccgcgatcggcgagctcatc
gccgaggccctcgacaaggtgggcaaggagggcgtcatcacggtcgaggagtcgaacacc
ttcggcctggagctcgagctcaccgagggcatgcggttcgacaagggcttcctcgcccgc
tacttcgagacggacccggagcgccaggaggccgtcctcgaggacccgtacgtcctgatc
gtcgagtcgaagatctcgaacgtcaaggacctgctgccgatcctcgaccaggtcatgaag
gctggccgctcgctcctcatcatcgccgaggacgtcgagggcgaggccctggcgaccctg
gtgctcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctgcaggacatcgcgatcctcaccggcggccaggtcatcacc
gagacggtcggcctcaagctcgagaacgcgacgctcgacctgctgggccaggcgcgcaag
gtcgtcgtcaccaaggacgagaccacgatcgtcgagggtgccggcgacgccgagctcatc
gccggtcgcgtcaaccagatccgcagcgagatcgagaagtcggactccgactacgaccgc
gagaagctgcaggagcgcctcgccaagctggccggcggcgtcgccgtcatcaaggccggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggccgcggtcgaggagggcatcgtcgccggtggtggcgtcgccctcatccaggcc
ggtgccgccgcgttcgagaagctcgagctcgacggtgacgaggccatcggtgcgcagatc
gtcgccgcggcggtctcggccccgctcaagcagatcgcgatcaacgccggtctcgagggc
ggcgtcgtcgccgagcgcgtcaagggcctcccggccggccagggcctcaacgccgccacg
ggcgagtacgaggacctgctcgccgcgggcgtcaacgacccggtcaaggtcacgcgctcc
gcgctccagaacgccgcgtcgatcgccgcgctgttcctcaccaccgaggccgtcgtcgcc
gacaagccggagccgccggccggcggtggcggtcacggcgacggtggcatgggcggcatg
gacttctga
DBGET
integrated database retrieval system
