Isoptericola variabilis: Isova_2736
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Entry
Isova_2736 CDS
T01520
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
iva
Isoptericola variabilis
Pathway
iva03030
DNA replication
iva03430
Mismatch repair
iva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Isova_2736
03430 Mismatch repair
Isova_2736
03440 Homologous recombination
Isova_2736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iva03032
]
Isova_2736
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_2736
Enzymes [BR:
iva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Isova_2736
DNA replication proteins [BR:
iva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Isova_2736
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Isova_2736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_14
Rad17
AAA_30
AAA_18
AAA_16
AAA_2
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEG45432
UniProt:
F6FUK5
LinkDB
All DBs
Position
complement(2983831..2987397)
Genome browser
AA seq
1188 aa
AA seq
DB search
MHDVNDADFEIVLPDTEPPTTTITDGPADGAYLVDREVTFSYSSSEPGRFTCMLDDEPVG
CTGSSVTLTGLAGGTHVFSVAAVDVTGNTDPTPEVRTFTVPIDDTELARSSGWSSVTDAA
AFGGSYSVAVQKDATLRTRIEGATGVALVVTTASGDGKVDVLVDGARVGSVSLDSRTGGD
PCAGPGGRLDGTAQRRADAGDEQQEAGTDRRSGRPHGLTRERERPAHRAQGRALAYTSMT
ASDAFPLAFQPDAPRGLDVLASNSPVSLRRPSGSTPTAVGEQFRTYFAFTDRGPLATTGH
RRGLWTGAAGVSVGASIVAGVTTALYRRYRPETFAEVIGQDHVTGPLMQALRSGRVSHAY
LFSGPRGCGKTTSARILARTLNCARNTPDKPLDTPCGECDSCRELARGGPGSLDVVEIDA
ASHNGVDDARDLRERATFAPARDRYKIFILDEAHMVTPQGFNALLKIVEEPPPHVKFVFA
TTEPDKVIGTIRSRTHHYPFRLVPPDVLGPYLEQLCAAEGIELGAGVVPLVTRAGGGSVR
DSLSVLDQLIAGASGGVVEYDVAVGLLGFTHATLLDDVVDALAARDGASIFRVVDQVIAS
GHEPRRFVEDVLERLRDLIVIAVSGDAADAVLRGLPADQLERMRQQASRLGVSELSRAAD
LVNAALTEMTGATSPRLHLELLCARLLLPGADDGTAGLAARIDRLERGGVVAAVAAPGAA
PRRDDDVTADAPAPAASGLSGAAAVRAALEAKRTATPAPAEVAREDAEVARPDAEVARED
TEVARPDVEVAPEGAEVAHHDAEVAREGAEVAPEPAATATPPAPSEPAPSEPAPSEPETT
AGVTAEVVRRRWDEVVANIGSPVTRALVGPNAQVISLEAGLLRLGFTAAGMARTFSQPRH
IDAVAESVYQTLGVQVRVEATIDEGRGDSSGGPAGGGGAGVPGPSAPAGPGGSSAASPES
GAPATSPGVTARPADTDDGGWPAVTPPGSAARSAASPASAIAPVGRPEAGARVGAVDAPR
SAVALAERPGAPADEAAPEPEAVSTPPAPEPEPEVAPAPGAAAPSAADDADAAWLAGVPL
SEPPEPDDAPEPPPEDVAPSWSAPRPTAARTPGPQVRETPRQAAERQAREYRAQAQAPAP
TADDHPAVDYDEPSADDPDIASTGLVGVPLVVQVLDGKVIDEITEDPA
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgacgtcaacgacgccgacttcgagatcgtcctgccggacaccgagccgccgacc
acgaccatcacggacggaccggccgacggtgcgtacctcgtcgaccgggaggtgaccttc
tcctactcctcgagcgagccgggacggttcacgtgcatgctcgacgacgagccggtgggc
tgcaccgggagctccgtcacgctgacggggctcgccggagggacgcacgtgttctcggtc
gcggccgtcgatgtcacgggcaacaccgacccgacccccgaggtgcggacgttcaccgtg
ccgatcgacgacacggagctggcgcggtcgtccggctggtcgagtgtcaccgacgcggcc
gcgttcggcggctcgtactcggttgccgtacagaaggacgcgaccctgcggacccgcatc
gagggcgcgaccggtgtcgcgctcgtcgtcacgacggcgagcggtgacggcaaggtcgac
gtcctggtcgacggtgcccgggtgggcagcgtgtcgctcgactccaggaccgggggggac
ccgtgtgctggtcccggtggccgactggacggcaccgcgcagcggcgagctgacgctggt
gacgagcaacaagaagccggtacggatcgacggtctggccgtccgcacggactgacccga
gagcgcgagcgcccggcccaccgagcccagggccgggcgctcgcgtatacctcgatgacg
gcgagcgacgccttcccgctcgccttccagccggacgcgccgcgcgggctcgacgtgctg
gcatcgaactccccggtctcgctgcgccggccctcagggtcgacgcccacggcagtcggc
gagcagttccgcacgtacttcgcgttcacggatcgcgggcctctcgcgacgacggggcac
cgccggggtctgtggacgggggctgccggggtgtcggtcggggcgtctatcgttgcgggg
gtgaccaccgctctgtaccgccgctaccggcccgagacgttcgccgaggtgatcggccag
gaccacgtcaccgggccgctgatgcaggcgctgcgcagcgggcgcgtcagccacgcgtac
ctcttctccggcccgcgcgggtgcggcaagacgacgagcgcgcgcatcctcgcccgcacc
ctcaactgcgcgcggaacacccccgacaagccgctcgacaccccgtgcggcgagtgcgac
tcgtgccgcgagctggcgcgcggcggtcccggctcgctcgacgtcgtcgagatcgacgcc
gcgagccacaacggcgtcgacgacgcgcgcgacctgcgcgagcgtgcgacgttcgccccg
gcccgcgaccggtacaagatcttcatcctcgacgaggcccacatggtcacgccgcagggc
ttcaacgcgctgctgaagatcgtcgaggagccgccgccccatgtgaagttcgtcttcgcg
acgacggagcccgacaaggtcatcggcaccatccgctcgcggacgcaccactacccgttc
cggctcgtcccgcccgacgtgctgggcccctacctcgagcagctctgcgcggccgagggc
atcgagctcggcgccggcgtggtcccgctcgtgacccgcgcgggcgggggctcggtgcgc
gactcgctctcggtcctcgaccagctcatcgcgggagcatcgggcggcgtcgtcgagtac
gacgtcgcggtcgggctcctcgggttcacgcacgccacgctgctcgacgacgtcgtggac
gcgctcgccgcgcgcgacggcgcgtcgatcttccgcgtcgtcgaccaggtcatcgcctcg
ggtcacgagccgcggcgcttcgtcgaggacgtgctcgagcgcctgcgcgacctcatcgtc
atcgccgtctcgggcgacgccgcggacgcggtgcttcgcgggctgccggcggaccagctc
gagcgcatgcgccagcaggcgtcgcggctgggtgtctcggagctgtcgcgcgcggccgac
ctcgtcaacgcggcgctcaccgagatgaccggcgcgacgtcgccccggctccacctcgag
ctgctgtgcgcgcggctgctcctgccgggcgccgacgacggcaccgccggcctcgccgcc
cgcatcgaccgcctggagcgcggcggcgtggtggcggccgtcgcggcgcccggtgcggcc
ccgcgtcgggacgacgacgtgacggctgacgcgcccgccccggcggcgtcggggctctcc
ggcgccgcggccgtgcgtgccgcgctcgaggcgaagcgcaccgcgacgcctgcccccgcc
gaggtagcgcgcgaggacgccgaagtagcgcggccggacgccgaggtagcgcgcgaggac
actgaggtagcgcggccggacgtcgaggtagcgcctgagggtgccgaagtagcgcaccac
gacgccgaagtagcgcgtgaaggtgccgaggtagcgcccgaacctgcagcaacggcgacg
cctccggcgccgagcgagccggcgccgagcgagccggcacccagcgagccggaaacgacg
gccggtgtcacggccgaggtggtgcgccgccggtgggacgaggtcgtcgccaacatcggc
agccccgtgacgcgggcgctggtcggccccaatgcgcaggtgatctcgctcgaggccggt
ctgctgcgcctcggcttcaccgcggcgggcatggcccggacgttctcccagccgcggcac
atcgacgcggtggcagagtccgtctaccagacgctcggcgtccaggtccgggtcgaggcg
acgatcgacgagggccgcggtgattcctcgggcggcccggccgggggaggcggagccggc
gttccgggaccgtccgcgccggccggcccgggcggcagctccgcggcgtccccggagtcc
ggtgcaccggcgacctcgcccggcgtcacggcacgacctgccgataccgatgacggcggc
tggcccgccgtcacgcctccggggtcggcagcgcggtcggccgcgagccccgcgtcggcg
atcgcgcccgtcgggcggcccgaggccggtgcccgcgtcggtgccgtcgacgcgccgcgg
tccgccgtcgcgctcgccgagcggcctggcgcaccggccgacgaggcggcgcccgagccc
gaggccgtgtccacgccgccagcgcctgagcccgagccggaggtcgcgcccgcgcctgga
gcggcggcgccgagcgcggccgacgacgccgacgccgcctggctcgccggcgtcccgctc
tccgagccgcccgagcccgacgacgcgcccgagccgccgcccgaggacgtcgcaccgtca
tggtctgcaccgcgcccgacggcggcccgaacgccggggccgcaggtccgcgagacgccg
cggcaggcggccgagcgccaggcgcgcgagtaccgggcccaggcacaggcaccggcgccg
acggcggacgaccacccggccgtcgactacgacgagccgtcggccgacgaccccgacatc
gcgtcgacgggcctcgtcggcgtgccgctcgtcgtccaggtcctcgacggcaaggtcatc
gacgagatcaccgaggacccggcctga
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