Isoptericola variabilis: Isova_2883
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Entry
Isova_2883 CDS
T01520
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
iva
Isoptericola variabilis
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iva03032
]
Isova_2883
03036 Chromosome and associated proteins [BR:
iva03036
]
Isova_2883
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_2883
DNA replication proteins [BR:
iva03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Isova_2883
Chromosome and associated proteins [BR:
iva03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Isova_2883
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Isova_2883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-DNA_bdg
DUF7342
DUF2267
DUF1989
Motif
Other DBs
NCBI-ProteinID:
AEG45568
UniProt:
F6FVR7
LinkDB
All DBs
Position
complement(3165691..3165975)
Genome browser
AA seq
94 aa
AA seq
DB search
MSLNKSELVSAIAAKSGLSKADAESALNAFQEVLIESLGKGEAVKVTGLLSVERVERAAR
TGRNPRTGEEISIPAGHGVKISAGSLLKKAVAAK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaacaagtccgagctcgtctcggccatcgctgccaagtccggcctcagcaag
gcggacgcggagagcgccctcaacgcgttccaggaggtcctgatcgagtccctcggcaag
ggcgaggcggtcaaggtcacgggcctgctgtccgtcgagcgtgtcgagcgtgccgcccgc
acgggtcgcaacccgcgcacgggcgaggagatctcgatcccggccggtcacggcgtcaag
atcagcgcgggctcgctcctcaagaaggccgtcgccgccaagtga
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