Isoptericola variabilis: Isova_2914
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Entry
Isova_2914 CDS
T01520
Name
(GenBank) Deoxyribonuclease IV (phage-T(4)-induced)
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
iva
Isoptericola variabilis
Pathway
iva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Isova_2914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_2914
Enzymes [BR:
iva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Isova_2914
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Isova_2914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Dus
Motif
Other DBs
NCBI-ProteinID:
AEG45599
UniProt:
F6FW55
LinkDB
All DBs
Position
3199047..3199835
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AA seq
262 aa
AA seq
DB search
MSVKIGAHVDLSDAVAQAKEIGADVVQVFVSDPQAWKVPPIEHPGGTEAFREEAAAAGLD
VYVHAPYVINVASTNNRIRIPSRKLLQQVMVRAEEIGAKGVIVHGGHVTAKDDPAAGFDN
WRKAIDALESDVPVLIENTAGGDFSMARRLERIEQLWAAVMQANGAENVGFTLDTCHAWA
GGIDLATAVDEIRGITGRIDLVHANDSRDAAGSGADRHTHFGLGMIPEELLVGVIATAGA
PVICETHGDMGPDIAWLRERLA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaagatcggtgcccacgtcgacctgtccgacgccgtcgcgcaggccaaggag
atcggcgcggacgtcgtccaggtgttcgtgtcggacccgcaggcgtggaaggtgccgccg
atcgagcaccccggaggcacggaggcgttccgcgaggaggcggccgccgccgggctcgac
gtgtacgtccacgcgccctacgtcatcaacgtcgcgtcgacgaacaaccggatccgcatc
ccgagccgcaagctgctgcagcaggtcatggtccgcgcggaggagatcggggccaagggc
gtcatcgtccacggcgggcacgtgaccgcgaaggacgacccggcggccggcttcgacaac
tggcgcaaggcgatcgacgccctcgagagcgatgtgcccgtgctcatcgagaacaccgcg
ggcggcgacttctcgatggcccgccggctcgagcgcatcgagcagctgtgggccgcggtg
atgcaggcgaacggcgccgagaacgtcggcttcacgctcgacacgtgccacgcctgggcg
ggcggcatcgacctcgcgacggcggtcgacgagatccgcggcatcacgggccgcatcgac
ctcgtccacgccaacgactcgcgcgacgccgccggctcgggcgcggaccggcacacgcac
ttcggcctcggcatgatccccgaggagctgctcgtcggcgtgatcgccacggcaggcgcc
ccggtcatctgcgagacgcacggcgacatgggccccgacatcgcctggctgcgcgagcgg
ctggcctga
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