Jejubacter calystegiae: FEM41_02650
Help
Entry
FEM41_02650 CDS
T05975
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
izh
Jejubacter calystegiae
Pathway
izh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FEM41_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
izh03019
]
FEM41_02650
03009 Ribosome biogenesis [BR:
izh03009
]
FEM41_02650
Enzymes [BR:
izh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FEM41_02650
Messenger RNA biogenesis [BR:
izh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FEM41_02650
Ribosome biogenesis [BR:
izh03009
]
Prokaryotic type
rRNA helicases
FEM41_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DeaD_C
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QCT18621
UniProt:
A0A4P8YDP2
LinkDB
All DBs
Position
complement(583165..585021)
Genome browser
AA seq
618 aa
AA seq
DB search
MADIETTFSELGLKAPILEALNDLGYEKPSPIQAACIPHLLEGRDVLGMAQTGSGKTAAF
SLPLLNNIDANLRAPQLLVLAPTRELAVQVAEACNDFSKHMRGVQVLALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQTSINTRPDISQSYWSVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGQRRLAKFAGRVHQQLEASDLDQYRELLSKLQPEDELDMET
LAAALLKMAQGERPLILPPDPVVERRPKREFRERDDRRGGERSERPRRERRDVGDMELYR
IEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGDVLSHFTRTRI
LNKPMNMQLLGDAQPRGERRGGGGGGGRNFNGERRGGGEGRRFNNERREGGGRFSGERRE
GGRGRREESGNRRRFGDA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatcgaaaccacttttagcgagctgggcctgaaagcccccattcttgaagca
cttaacgacctgggctatgagaagccttctccgatccaggctgcctgtatcccgcacctg
ctggaaggtcgcgatgtgctggggatggcccagaccggtagtggcaagaccgcggcattt
tccctgccgctgctgaacaacattgacgcaaacctgcgcgctccgcagcttctggtgctg
gcgccgacccgcgaactggcggtgcaggttgctgaagcctgtaatgatttctctaaacac
atgcgcggcgtacaggttctggcgctttacggcggccagcgttacgacgtgcaactgcgc
gccctgcgtcagggaccgcagatcgttgtgggtaccccgggtcgtctgcttgaccacctg
aagcgcggtaccctggatctctccaacctgaaagggctggtactggatgaagccgacgaa
atgctgcgtatgggctttatcgaagatgtggaaaccatcatggcgcagatcccggaaggg
catcagaccgcgctgttttccgccaccatgccggaagcgatccgccgcatcactaagcgc
tttatgaaggatccgcaggaagtgcgtatccagaccagcattaacactcgtccggacatc
agccagagctactggagcgtctggggaatgcgtaagaatgaagcgctggttcgtttcctg
gaagcggaagatttcgacgctgcaatcatcttcgtgcgtaccaaaaatgccactcttgaa
gtggccgaagcgctggagcgtaacggctacaacagcgccgcgctgaacggcgacatgaac
caggcgctgcgtgagcagaccctggagcgtctgaaggatggccgcctggatatcctgatt
gccaccgatgttgctgcccgtggtctggatgtggatcgcatcagcctggtcgtgaactac
gatatcccgatggatgccgaatcttatgtacaccgtatcggtcgtaccggtcgtgctggt
cgtgcagggcgcgcgctgctgttcgtggaaaaccgcgagcgtcgcctgctgcgcaacatc
gagcgcaccatgaagctgaccatcccggaagtggaactgccgaatgcagaactgctgggc
cagcgccgtctggcgaaattcgccggtcgcgttcatcagcagctggaagccagcgatctg
gatcagtatcgcgaactgctgagcaagctgcagccggaagacgagctggatatggaaact
ctggccgccgcgctgctgaaaatggcacagggtgagcgtccgctgattctgccgccggat
ccggttgtcgagcgtcgtcccaagcgcgaattccgtgagcgtgacgaccgccgcggtggc
gagcgcagcgagcgcccgcgccgtgaacgtcgcgacgttggcgatatggagctttatcgc
attgaagtgggccgtgatgacggtgtggaagttcgccatatcgtgggcgccatcgccaac
gaaggtgacatcagcagccgttatatcggtaacatcaagctgtttgcttcccactcaacc
atcgagctgccgaaagggatgccgggcgatgtgctgtcgcactttacccgtacccgcatt
ctgaacaagccgatgaacatgcagctgttgggcgatgcccagccgcgcggcgaacgtcgc
ggcggtggcggtggcggtggtcgtaacttcaacggcgagcgtcgcggtggcggtgaaggt
cgtcgctttaacaacgaacgtcgtgaaggcggtggtcgcttctccggtgagcgtcgtgaa
ggcggtcgcggtcgtcgcgaagagagcggcaatcgtcgtcgcttcggtgatgcataa
DBGET
integrated database retrieval system
