Jejubacter calystegiae: FEM41_03960
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Entry
FEM41_03960 CDS
T05975
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
izh
Jejubacter calystegiae
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
izh03021
]
FEM41_03960 (rpoH)
Transcription machinery [BR:
izh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FEM41_03960 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
TelA
SANT_DAMP1_like
2Fe-2S_thioredx
Hema_esterase
Motif
Other DBs
NCBI-ProteinID:
QCT18865
UniProt:
A0A4P8YE26
LinkDB
All DBs
Position
complement(832434..833291)
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AA seq
285 aa
AA seq
DB search
MTNEMQNLALAPVGNLESYIRAANAWPMLSAEEERALAERLHYQGDLEAAKKLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMPSDDDSHDGQPMAPVLFLQDKTSNFADGIEDDNWEEHAADKLSDAMQGLDERSQHI
IRARWLDEDNKSTLQELADCYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgagatgcaaaatttagctttagccccggtgggtaacctggagtcttatatc
cgggccgccaatgcctggccgatgttgtcggctgaggaagagcgggcgcttgctgaaagg
ctgcattaccagggcgatctggaagcagctaagaagctgatcctgtcccacctgcgcttt
gttgttcatatcgctcgtaactatgccggctatggcctgccgcaggcggacctgatccag
gaagggaatatcggcctgatgaaagcggtgcgccgctttaacccggaggtcggggtgcgt
ctggtctctttcgccgttcactggatcaaggcggagatccacgagtatgtgctgcgcaac
tggcgtatcgttaaagtggcgaccaccaaagcccagcgcaagctgttcttcaacctgcgt
aaaaccaagcagcgtcttggctggtttaatcaggacgaagtcgagatggtggccagggaa
ctgggcgtcagcagtaaggacgtgcgtgaaatggagtcgcgaatggcggcccaggacatg
acgttcgatatgccgtccgacgatgattcccacgacggccagccgatggcgccggtgctc
tttttgcaggacaaaacctcgaactttgccgatggcattgaggatgataactgggaagag
cacgccgcggataagctctctgacgcgatgcagggtctggacgagcgtagccagcatatt
attcgcgcccgctggctcgatgaagacaacaagagcacgctgcaggaactggccgactgc
tacggcgtttccgccgaacgtgtgcgtcagcttgaaaagaacgcgatgaaaaagctgcga
gccgcgatcgaagcctga
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