Jejubacter calystegiae: FEM41_06725
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Entry
FEM41_06725 CDS
T05975
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
izh
Jejubacter calystegiae
Pathway
izh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FEM41_06725 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
izh03019
]
FEM41_06725 (recQ)
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_06725 (recQ)
Enzymes [BR:
izh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FEM41_06725 (recQ)
Messenger RNA biogenesis [BR:
izh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FEM41_06725 (recQ)
DNA repair and recombination proteins [BR:
izh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FEM41_06725 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF6972
Motif
Other DBs
NCBI-ProteinID:
QCT19368
UniProt:
A0A4P8YI03
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All DBs
Position
1459872..1461722
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AA seq
616 aa
AA seq
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MAQAEVINQERLAAQVLQETFGYQQFRPGQETIINTVLEGRDCLVVMPTGGGKSLCYQIP
ALVLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREEQQSVLVGCHSGEVRLLY
IAPERLMMDNFIERLSHWNLSLLAVDEAHCISQWGHDFRPEYAALGQLRARLPQVPFVAL
TATADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLEQLMRYVQDQRGKSGI
IYCNSRSKVEDTAARLQSRGISAGAYHAGLDNAVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPRRYDALVDAQKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRELQHDKLPVYGIGREHSHEHWVSVIRQLIHLG
VVTQNIASHSALQLTEAARPLLRGESPLMLAVPRVQALKPRVSQRATASNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLGVNGVGTRKLERFGRPFMMLIR
EHVDGEDEQDGYSPFA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagttattaatcaggagcggcttgcggcacaggtgcttcaggaaacc
ttcggctatcagcagttccgcccaggtcaggagaccatcatcaacacggtgttggaaggg
cgcgactgcctggtggtgatgcccaccggcggcggtaagtcgctctgttaccagatacct
gcgctggtgcttgatggcctgacggtggtggtttcgccgctcatctctctgatgaaagat
caggtcgatcagcttctggcaaacggcgtggccgctgcctgtctgaactccacgcagagt
cgtgaagagcagcagtcggtactggtgggctgccacagcggcgaggtgcgcctgctgtac
atcgcccctgaacggctgatgatggataacttcatcgaacggctcagccactggaatctg
tcgctgctggcggtggatgaagcgcactgtatctcccaatgggggcacgacttccgccct
gagtatgcggctctgggccagctacgcgctcgcctgccgcaggtgccttttgtagcgctg
accgcaacggcggacgacaccacccggcgtgatatcgtccgcctgctggggctgaacgac
cccctgattcaggtcagcagcttcgaccgtcctaacattcgctatatgctgatggagaag
ttcaaacccctcgaacagctgatgcgctacgtgcaggatcagcgcggtaagtccggcatt
atctactgcaacagccgttcgaaggtggaagacaccgccgcccgtctgcaaagtcgggga
atcagcgccggggcttaccacgcgggcttggataacgccgtgcgcgccgaggtgcaggag
aaattccagcgcgacgatttgcagatcgtggtggcgacggtggcctttggaatgggcatc
aataaacccaacgtccgtttcgtggtgcatttcgacatcccccgtaatatcgaatcctac
taccaggagacaggccgcgccgggcgcgatggcctgcctgctgaagccatgctgttttac
gatccggcggatatggcctggctgcgtcgctgtctggaagagaaacctgccggacagttg
caggatattgaacgtcacaagcttaacgccatgggcgcttttgccgaggcccagacctgc
cgccgtctggtgctgctcaactactttggtgaagggcgtcaggagccctgcggcaactgc
gatatctgcctcgatccgccacggcgctacgatgcgctagtggatgcccagaaggcgctt
tctaccatttatcgcgttaatcagcgctttgggatgggttacgtggtggaggttctgcgc
ggcgctaataatcagcgcatccgtgaactacagcacgacaagttaccggtctacggtatt
ggccgggaacacagccatgaacactgggtgagcgtgattcgtcagttgattcatctgggc
gtcgtcacccagaatatcgccagccattctgcgcttcagctcaccgaagcggcacgtccg
ctgctgcgtggcgagtcgccgctgatgctggcggtgccgagggtacaggcattaaagccc
cgggtcagccagcgggcgacggcgagcaactacgatcgtaagttgttcgctaaattgcgt
aagctgcgtaaagcgatcgccgatgaagagaacattccgccgtatgtggtatttaacgac
gcaacgcttatcgagatggcggagcagatgccgttaagccctggcgagatgcttggcgtt
aacggtgtgggcacccgcaagctggaacgctttggtcgtccgtttatgatgctgattcgc
gagcacgtcgacggtgaggatgagcaggacggttattccccctttgcctga
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