Jejubacter calystegiae: FEM41_07820
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Entry
FEM41_07820 CDS
T05975
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
izh
Jejubacter calystegiae
Pathway
izh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FEM41_07820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
izh03019
]
FEM41_07820
03009 Ribosome biogenesis [BR:
izh03009
]
FEM41_07820
Messenger RNA biogenesis [BR:
izh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FEM41_07820
Ribosome biogenesis [BR:
izh03009
]
Eukaryotic type
Pre-60S particles
RNases
FEM41_07820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCT19567
UniProt:
A0A4V1G7G5
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All DBs
Position
1705893..1706438
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AA seq
181 aa
AA seq
DB search
MSGNENNLIWIDLEMTGLDPEQDRIIEIATLVTDANLNILAEGPVIAVHQSDAQLALMDE
WNVRTHTGSGLVERVKASRYDDRAAEQATIEFLKEWVPQGTSPICGNSVGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFKKQNTHQALDDIRESVAELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaatgaaaacaatctgatctggattgacctggagatgacggggcttgatccg
gagcaggatcgcatcattgagattgccacgctggtgaccgatgctaatttgaatattctt
gccgaagggccggtgattgcggtccatcagtccgatgcgcagctggcgctgatggacgag
tggaacgtgcgtacccataccggcagtggactggtggagcgggttaaggcgagccgctat
gacgatcgtgccgccgaacaggccactattgaattcctgaaagagtgggtgccccagggc
acatcgccgatttgtggcaatagcgtgggccaggaccgtcgctttctgtttaagtacatg
ccggaactggaagcgtacttccactaccgctatctggatgtcagcaccctgaaagagctg
gcgcggcgctggaagcctgagattctggcaggctttaaaaagcagaatacccatcaggcg
ctggatgatatccgtgaatccgtggctgagctggcgtactatcgtgagcactttattcag
ctataa
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