Jejubacter calystegiae: FEM41_09885
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Entry
FEM41_09885 CDS
T05975
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
izh
Jejubacter calystegiae
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
izh03016
]
FEM41_09885 (thpR)
Enzymes [BR:
izh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FEM41_09885 (thpR)
Transfer RNA biogenesis [BR:
izh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FEM41_09885 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QCT19938
UniProt:
A0A4P8YJK2
LinkDB
All DBs
Position
complement(2148525..2149055)
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AA seq
176 aa
AA seq
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MSATRRLFFALEIPAAIQQQILHWRAQQFPQETGRPVAAANLHMTLAFLGEVGSKKQQAL
TTLAGRIRQPGFALTLDDAGHWPRSRVVWLGTRRAPRGLLQLASLLRAQAERSGCPQGTR
PFHPHVTLWRHAQSLVKLPAPGFSWRWEVENFALYESLFEQGRTRYRALERWPLTQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacacgtcgcctgttttttgctctggagattcccgccgccattcagcagcag
atcctgcactggcgcgcgcaacagttcccccaggagaccggacgcccggtagcggcagcc
aacctgcatatgacgctggcctttctgggcgaggtgggaagcaaaaaacagcaggcgctg
accaccctggccgggcgcatccgccagcccggcttcgccctcacgctggacgatgccggt
cactggccgcgctcccgggtggtgtggctgggcacgcgacgcgcgcctcgcggtctgctg
cagctcgcctctctgctgcgcgctcaggccgaacgcagcggctgcccccagggaacccgc
ccttttcacccccatgtgacgctctggcgccatgcacagtcgctggtcaaactcccggca
ccgggatttagctggcgctgggaggtggaaaatttcgccctctatgagtcgctgttcgag
cagggccgcacccgttaccgggcgcttgagcgctggccgttaacccaataa
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