Jejubacter calystegiae: FEM41_10075
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Entry
FEM41_10075 CDS
T05975
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
izh
Jejubacter calystegiae
Pathway
izh03030
DNA replication
izh03430
Mismatch repair
izh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEM41_10075 (dnaE)
03430 Mismatch repair
FEM41_10075 (dnaE)
03440 Homologous recombination
FEM41_10075 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
izh03032
]
FEM41_10075 (dnaE)
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_10075 (dnaE)
Enzymes [BR:
izh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEM41_10075 (dnaE)
DNA replication proteins [BR:
izh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FEM41_10075 (dnaE)
DNA repair and recombination proteins [BR:
izh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FEM41_10075 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCT19976
UniProt:
A0A4P8YJ86
LinkDB
All DBs
Position
2193462..2196944
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRIHSDYSMIDGLAKVGPLVKKAAALGMPSMAITDFTNLCGLVKFYGGAHGA
GMKPLVGADFHMVNELLGDEPVELTVLAMNNVGYQNLTLLISRAYQRGYGAAGPLIDRDW
LVELNEGLIVLSGARRGDVGISLLRGNDALVEQCLAFWQEHFPERYYLELIRTGRADEES
YLHAAVRLAEDRGIPVVATNDVRFLVADDFDAHEIRVAIHDGYTLDDPKRPRNYSSQQYL
RSEDEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSREGL
EERLEFLYPDPEERAQRRPPYDERLEIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGRHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKQGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHDSLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSSFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKINRRVMEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEAPEQVEQSYSNCLPWPEQQQLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKVTTAAGLVLAARIMITKRGNRIGICTLD
DRSGRLEVMLFSEALEKYQQLLEKDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGAAWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgttttgtccacctgcggatacacagtgactactccatgatcgatggc
ctggcgaaggtggggccgctggtgaaaaaagcggctgcccttggcatgccatcgatggcg
attaccgacttcaccaacctgtgtggtctggtgaagttttacggcggggctcacggcgcc
ggaatgaagccgctggtgggcgccgacttccatatggtcaacgagctactgggtgatgaa
cccgtcgaactgaccgtgctggcgatgaataacgttggctatcagaacctgaccctgctt
atttctcgcgcctatcagcgtggctatggcgccgcgggtcccttaattgaccgagactgg
ctggtagagctgaatgaggggctgatcgtgctgtccggcgcccgccggggcgatgtgggt
atcagcctgctgcgcggtaacgatgccctggttgaacagtgtctggcattctggcaggag
cacttccccgaacgctactatctggagctgattcgaaccgggcgcgcggatgaagaaagc
tatctgcacgctgccgttcgcctggcggaagaccgtgggataccggtggtcgcgactaac
gacgtgcgcttcctggtcgccgacgatttcgacgcccatgaaattcgcgttgccattcac
gatggctataccctggacgatcccaagcggccgcgtaattattccagccagcagtatctg
cgcagtgaagatgagatgtgcgagctgtttgccgacatccccgaagcgctggaaaacagc
gtggagatcgccaaacgctgcaacgtgacggtacgactgggcgagtacttcctgccgcag
ttccccaccggtgatatgactaccgaagatttcctggtggcgaaatcccgtgaaggcctt
gaggagcgcctggaatttctctacccggatccggaagagcgggcccagcgtcgccctccc
tatgatgaacgtctggagatcgaactccaggtaatcaaccagatggggttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacggcgtgccggtagggcct
ggacgaggatccggcgccggttcgctggtggcctatgcgctgaaaatcaccgatctcgac
ccgttggagttcgatctgctgttcgaacgcttcctgaacccggaacgtgtctcgatgccc
gacttcgacgtcgacttctgtatggagaagcgcgaccaggtcattgagcacgtcgcggac
atgtacggccgcgacgcggtatcgcagattatcaccttcggtaccatggccgctaaagcg
gttatccgcgacgtaggccgggtactgggccatccctatggctttgtcgacaggatctcc
aaactggtgccgccagacccgggcatgaccctggcaaaagccttcgaggcggagcctcaa
ctgccggagatctacgaggcggacgaagaggtgaaggcgcttatcgacatggcgcgtaag
ctggaaggggtcacccgtaacgccggtaaacacgccggtggtgtggtgatcgcgcctacc
aaaatcaccgactttgcgccgctctactgcgacgaagaggggcgccatccggtcacccag
ttcgacaagaacgacgtggaatatgccgggctggtgaagttcgacttcctggggctgcgt
accctgaccatcatcaactgggcgctggagatgatcaacgcccggcgtgaaaagcagggc
gaaccgccgctggatatcgccgccattccgctggacgataaaaagagcttcgatatgctg
caacgctcggaaaccacggcggtattccagcttgaatcgcgcggcatgaaggatctgatc
aagcgcctgcagcctgactgcttcgaagatatgatagccctggtggccctgttccgaccg
gggccgctgcagtccgggatggtggataactttatcgaccgtaagcacgggcgcgaggag
atctcttacccggatattcagtggcagcacgatagcctgaagccggtactggagccaact
tatggcatcatcctctatcaggaacaggtgatgcagatagcccaggtgctttcgggctat
accctgggcggcgcggatatgctgcgtcgcgctatgggtaagaaaaagccggaagagatg
gccaagcagcgttccagttttgaagacggggcgaaaaagaacggcatcgacggcgaactg
gcgatgaaaatcttcgaccttgtggagaagttcgctggttacggctttaacaaatcgcac
tccgccgcctatgcgctggtgtcatatcagactctgtggcttaaggcacactatcccgct
gaatttatggcggcggtgatgaccgccgatatggataacaccgataaagtggtgggactg
gtggatgagtgctggcgtatgggactgaagatcctgccgccggacatcaattccgggctg
tatcatttccacgtgaatgatgacggtgaaattgtctacggtatcggcgccatcaaaggg
gtgggcgaaggtcctatcgaagcgattattgaggcgcgtaacaacggcggctatttccgt
gagttgttcgatctctgcgcccgtaccgatatcaagaagatcaaccgccgggtgatggaa
aagctcatcatgtccggcgccttcgatcgccttgggccgcatcgcgctgcgctgatgaat
tcgctgggggatgcccttaaagcggcggatcagcatgctaaagccgaggccattggccag
gccgatatgtttggcgtgctggcggaagcgccggagcaggtggagcagtcctactcgaac
tgcctgccctggccggaacagcagcagctcgacggtgagcgcgaaaccctgggactgtat
ctgacgggccaccccatcaatcagtacctgaaagagatcgagcgatacgtcggcggtgtg
cgtctgaaagacatgcacccgacggatcgtgggaaggtgaccacggcggcgggactggtg
ctcgctgcccgtattatgatcactaagcggggaaaccgcatcggcatctgcacccttgat
gaccgttccggacgcctggaggtcatgttattctctgaggcgctggaaaaataccagcaa
ctgctggaaaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagc
ggtgggcttaaaatgatggcccgggaagtgatggacattgacgaggctcgcgaaaagtat
gcgcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcaatctctggaaccccatcgttcggggaccattccagtgcatctctactatcag
agggcggatgcgcgtgcacggctgcggtttggcgctgcatggcgcgtgtcgcccagcgat
cgtttacttaacgatctgcgcggtctgataggttcggagcaggtggaactggagtttgac
taa
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