Jejubacter calystegiae: FEM41_10780
Help
Entry
FEM41_10780 CDS
T05975
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
izh
Jejubacter calystegiae
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_10780 (sbcC)
DNA repair and recombination proteins [BR:
izh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEM41_10780 (sbcC)
Archaeal homologous recombinant proteins
FEM41_10780 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
cobW
nSTAND3
ABC_ATPase
NTPase_1
AAA_15
TsaE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCT20099
UniProt:
A0A4P8YHE1
LinkDB
All DBs
Position
complement(2334631..2337774)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILTLRLRNLNSLRGEWKIDFSAEPFVSNGLFAITGPTGAGKTTLLDAICLALYHKTPR
LSSISQTQNELMTRDCADCLAEVEFEVRGVAYRAFWSQNRARGLADGKLQAPRVELARCD
SGEILADKVKDKLDLQEQLSGLDYDRFTKSMLLSQGQFAAFLNADANTRAALLEELTGTE
IYGRLSARVFEQHRQAKSELEQLEAQAGGVTLLDEAQRQQLNQGLQALTDEEKKLTGEQQ
QCQRHHQWLQQLHQRRQRREQAQQALNQARQALEQAGPDLARLARAQPAARLQPLWQQRQ
QQTQMLATTQQQQQQITAQLQAQLTRRRQIRSGAQRQAEDIRLRHRTLENWLSEHSHFSR
WRDELAGWRAAFSQRRREQQQLTALAHTLSELDARLSQLPTAGADDSHAQVSERLQKMAV
ERPLRNRLALLHSRFAPLAQRQQEQQQELQTLIARLTEQEKTLEQRRTDFRHKKQLVEEV
QKICALEQTIVRLQDERARLQPEQPCPLCGSTQHPAVERYQSLEPGENQQRLAQLEREKN
ALAEQGAALRGQLEAWQQRRTQLEADGKRLAEEQNEQEKAWRQLNSELGTDFAPGQPISG
WLEQQEQEEQRLRSLLQRIELETQHKTAQAQRQSLIQEQERQQQSIQQSLAALNLSWPDI
DQEAAWLEAREAENRQWQQHQEQLPQLQTQLQRMEQVLTTLPQEDDATGDDPAQVPDDWH
KIHDDCLSLAGRSQSLARQEAEERQRLETASRDFNQRLEASDFADEAAFLAARLDDESLQ
ALEQRKIALERENHQQQTLLDEAERALRDSHEQRPEQASDEDNPALLAQRLEALAGQLHA
NAARQGELRQQLRYDDENRQRRQSLTAQIAAAQQTLEEWSHLNHLVGSREGDKFRRFAQG
LTLDNLVWLANRQLTRLYGRYLLQRKESDSLELEVVDTWQGEAVRDTRTLSGGESFLVSL
ALALALSDLVSHRTRIDSLFLDEGFGTLDARTLDIALDALDALNASGKTIGVISHVEAMK
ERIPVQVRVRKINGLGISRLESQFAVN
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaaccctgcgcctgcgcaatctgaactcactgcgcggcgaatggaaaatt
gatttcagcgccgagcccttcgtcagcaacggcctgtttgccattaccggccccaccggc
gccgggaagaccaccctgctggatgctatctgcctggcgctgtatcacaaaacgccgcgc
ctgagcagtatctcccagacccagaatgagctgatgacccgggactgcgccgactgtctg
gcagaggtggaatttgaagtacggggcgtggcgtatcgcgccttctggagccagaaccgc
gcccggggtctggcagatggcaagctccaggcccccagagtggagctggcgcgctgcgac
agcggcgaaattctggcggataaagtcaaagacaaactggatctccaggagcagctttcc
gggctggactatgaccgcttcactaaatcaatgctgctttcccaggggcagttcgccgcc
ttcctgaatgccgatgccaatacccgcgcggcgctgcttgaagagctgaccggcaccgaa
atctatggccgcctgtcggcccgggtctttgagcaacatcgccaggcaaagagcgaactg
gaacaactggaagcccaggcgggcggcgtcactctgctcgatgaagcccaacggcagcag
ttgaatcagggtttgcaggcgctcactgacgaggaaaaaaaactgaccggcgagcagcag
cagtgccagcgccatcatcagtggctacagcagttgcatcagcgtcgccagcgccgggaa
caggcgcaacaggccctgaaccaggcccgccaggcgctggaacaggctggccccgatctg
gcccgcctggcacgagcgcagcccgccgcccgccttcagcccttgtggcagcagcgccag
cagcagacgcaaatgctggcgaccacccaacagcaacagcagcagataacggcgcagctt
caggcgcaactgacacgtcgtcgtcagattcgcagcggcgcccaacgccaggctgaggat
atccgcctgcgccacagaacgctggaaaactggctaagcgagcactcacatttttcccga
tggcgcgatgaactggcaggctggcgcgctgcttttagtcagaggcggagggagcagcag
cagctaaccgccctcgcccacaccctgagcgaactcgatgcgcgcctgagccagcttccc
acggcgggcgcagacgatagccatgctcaggttagtgagcgtttacaaaaaatggcggtg
gaacgcccgctgcgtaaccgtctggcgctgctccactcacgctttgcgccgctggctcag
cgccagcaggagcaacagcaggaactccagactctgatagcccgcctcaccgaacaggaa
aagacgctggaacaacggcgcaccgatttccgccacaaaaaacagctggtggaagaggtg
cagaagatctgcgccctggaacaaactatcgtcagacttcaggacgagcgcgcccggcta
cagccggaacagccctgcccgctgtgcggctccacccaacatcccgcagtggaacgctat
cagtccctggagcccggagaaaatcagcagcgtctggcgcaactggagcgcgaaaaaaac
gccctggcggaacagggcgcagctctgcgcggccaactggaagcctggcagcagcgccgc
acccaactggaagccgacggcaaacggctggcggaagagcagaacgagcaagagaaggcg
tggcgtcagctcaatagcgaactcggcaccgactttgcgccaggtcagcccattagcggc
tggctggaacaacaggagcaggaggaacagcggctgcgttcgctgctgcaacgcattgaa
ctggaaacccagcataagacggctcaggcccaacgtcagtcgctgattcaggagcaggag
cgccagcagcagtcaattcaacagagcctggcggcgctgaaccttagctggcccgacatc
gaccaggaggccgcctggctggaagcgcgtgaggcggaaaaccgccagtggcaacagcat
caggagcagcttcctcagcttcagacccagctacaacgcatggagcaggtactcactacc
ctgccccaggaggatgacgccaccggggatgaccccgctcaggtgccggacgactggcat
aaaatccacgacgattgcctgtcgctggcaggcagaagccagagcctggcccggcaggaa
gcagaggagcgtcagcgcctggaaaccgccagccgcgacttcaaccagcggcttgaggcc
agcgattttgccgacgaagccgcgttcctcgccgctcgactggacgacgagagcctgcag
gcgctggaacagcgtaaaatcgcgctggagcgggagaatcatcaacagcaaacgctgctg
gatgaagccgaacgcgcgctgcgcgacagccatgaacagcgcccggaacaggccagcgat
gaggataacccggcgctgctcgcccaacggctggaggcgctggctggccagttacacgct
aacgctgcccgccagggcgaactgcgccagcaactgcgttacgatgacgaaaaccgccag
cggcgccagagcctgacggcacagatcgctgcggctcagcagacgctggaagagtggagc
cacctgaatcatctggtgggttcccgtgaaggggataaattccgccgctttgcccaggga
ctaacgctggataatctggtctggctggcgaatcgccagttaacccgcctttatggccgc
tacctgctccagcgcaaagagagcgattcgctggagctggaggtagtggacacctggcag
ggcgaagcggtacgcgatacccgcacgctatcgggcggggaaagctttctggtaagcctg
gcgctggccctggcgctctccgacctggtcagtcaccgcacccgtatcgattcgctgttc
cttgacgaagggttcggtaccctggatgcccgcaccctcgatatcgccctcgacgcgctg
gatgccctgaacgccagcggcaaaaccattggggttatcagccacgtcgaagccatgaaa
gagcgtattccggtgcaggttagagtcagaaagattaacgggctgggcatcagccgtctg
gagagtcagtttgccgtgaattag
DBGET
integrated database retrieval system
