Jejubacter calystegiae: FEM41_13135
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Entry
FEM41_13135 CDS
T05975
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
izh
Jejubacter calystegiae
Pathway
izh03030
DNA replication
izh03430
Mismatch repair
izh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEM41_13135 (holA)
03430 Mismatch repair
FEM41_13135 (holA)
03440 Homologous recombination
FEM41_13135 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
izh03032
]
FEM41_13135 (holA)
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_13135 (holA)
Enzymes [BR:
izh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEM41_13135 (holA)
DNA replication proteins [BR:
izh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FEM41_13135 (holA)
DNA repair and recombination proteins [BR:
izh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FEM41_13135 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QCT20528
UniProt:
A0A4P8YL35
LinkDB
All DBs
Position
complement(2881951..2882982)
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AA seq
343 aa
AA seq
DB search
MLKLWPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRHVAVEHDFTEHHSVAIDASTD
WQALFALSQELSLFASRQTLLLQLPDNGPNAAIAGHLEKLTGLLHDDLLLIVRGNRLTRA
QENAAWYNALSKNAVQVNCQTPEQAQLPRWVASRARQMNLSPDEAAIQLLCYCYEGNLLA
LNQALERLSLLWPDGKLTLPRIEQAVNDAAHFTPFHWVDALLAGKSTRALHILQQLRLEA
IEPVILVRSIQRELLQLVNLKRQSAQTPLRTLFDQQRVWQNRRPLISEALNRLSAEQLWQ
AVRLLNQIELTIKQDFGQSVWAELESLSLLLCHNRLPDLFIHD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaactctggccggaacagctccgcgcgcagctcaacgaagggctgcgcgcggct
tatctgctactgggaaacgaccccttactgcttcaggagagtcaggacgcggtgcgccat
gtcgccgtggagcatgactttaccgaacatcacagcgtggcaatcgatgcctctaccgac
tggcaggcgctatttgcgctaagtcaggaactgagcctgttcgccagccgccagaccctg
ctgttacagcttccggacaacggccccaatgccgccatcgccggacatctggaaaagctg
acagggctgttacatgacgatttgctgctgattgtgcgcggcaaccgcctgacccgcgct
caggaaaatgccgcctggtataacgccctgagcaaaaacgcagtgcaggtcaactgccag
accccagaacaggcccagctaccgcgctgggtcgccagccgggcccggcagatgaatctt
agccctgatgaagcggctatccagttactgtgttactgctatgaaggcaacctgctggcg
ctgaatcaggcgttggagcgcctgtcgctgctgtggccggacggaaaactgacgcttccc
cgtatagaacaggccgtcaacgatgccgcccactttaccccctttcactgggtggatgcc
ctgctggcgggaaaaagcacccgggcgctgcatattttgcagcagctacgactggaggcg
atcgagccggtaattctggtgcgctcgatacagcgcgaactgctgcaactggtcaacctg
aaacgtcagtcagcccaaaccccgctgcgtacgctattcgatcaacagcgggtctggcag
aatcgtcggccgctgattagcgaggcgcttaatcgcctcagcgcggaacagctgtggcag
gccgtacgtctgctgaaccagatagagctcaccatcaaacaggatttcggtcagtccgta
tgggccgagctggaaagcctttccctgctgctttgtcataaccggttgccggatcttttt
atccatgactga
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