Jejubacter calystegiae: FEM41_13370
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Entry
FEM41_13370 CDS
T05975
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
izh
Jejubacter calystegiae
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_13370 (phrB)
Enzymes [BR:
izh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FEM41_13370 (phrB)
DNA repair and recombination proteins [BR:
izh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FEM41_13370 (phrB)
Prokaryotic type
FEM41_13370 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QCT20565
UniProt:
A0A4P8YIH9
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All DBs
Position
2929412..2930839
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AA seq
475 aa
AA seq
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MTTRLVWFRRDLRIHDHPALKAACRGDGARVIALYLATPQQWEQHSMAPRQAWFIRQHVA
ALGRSLAELGIPLQVAVVPDYRASVDWIDAFCQRHRVTELFYHYQYELDERRRDAALERA
LDGKVTCQGFDDGVLLAPGSVTTGSGTSYQVFTPFSRAVIRRLSQALPECVAPPSACGTP
LRAPDIPDFDYPEQTVSEADFPVGEVAAQARLAAFCHQTAAEYDAQRDFPARPGTSRLSP
WLAVGALSPRQCLVQLLENHPDALTGGPGAVWLKELIWRDFYRQVMVARPEMSRYQPLIP
WTAAIDWRDDPQGFQAWCEGRTGFPIVDAAMRQLNATGWMHNRLRMIAASFLIKDLRIDW
RQGERYFMSQLIDGDLASNNGGWQWAASTGCDAQPWFRIFNPTTQGQKFDRGGAFVRHWL
PALDAVPGSALHAPWEWADKQGMVLDYPRPLVDHKQARETTLAAYQAARNKESSR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccggctggtctggtttcgccgcgacttgcgtattcacgatcatccggcgcta
aaggcggcctgccgcggggatggcgcacgcgttattgcgctctatcttgcgacgccgcaa
cagtgggagcagcattccatggcaccacgccaggcctggtttatccgccagcatgtcgcg
gcgttagggcgttcactggcggaactcggtattccgctccaggttgccgtggtgccggac
taccgcgccagcgttgactggattgatgcgttctgtcagcggcaccgggtgacggagctg
ttctatcactaccagtacgaactggatgagcgacggcgtgatgcggcactggagcgggcg
ctggatggcaaagtgacgtgtcagggttttgatgacggcgtactgctggcgcctggcagc
gtcaccaccgggagcggtacgtcatatcaggtctttaccccatttagtcgggcggtgatt
cgtcgtctgagccaggcgctgcccgaatgcgtggcgccgccatcggcctgcggtacgccg
ttgagggcgccggatatcccggattttgactatcccgaacagacggtatcggaggcggac
tttcccgttggagaggtggctgcacaggcgcggctggcggcgttttgccatcagactgcg
gcagaatatgatgcgcagcgcgactttccggcgcgaccgggcaccagtcgtctttcgccc
tggcttgccgtgggggcgctgtcgccacgtcagtgtctggtgcagctccttgaaaaccac
cccgatgcgctgacagggggcccgggcgccgtctggctcaaagaactcatctggcgggat
ttttatcgccaggtgatggtggcgcgcccggagatgagtcgctaccagccgctgattccc
tggacggcggcgattgactggcgtgacgatccgcagggattccaggcctggtgtgaaggg
agaaccggctttccgattgtggatgccgcgatgcgccagctcaacgccacaggctggatg
cataaccgcctgcgtatgattgcggcaagttttctgataaaggatttgcgtatcgactgg
cgccagggagaacgctattttatgtctcagttgatcgacggcgacctggcctctaataat
ggcggatggcagtgggcggcctctacgggatgcgatgctcagccgtggtttcgtattttt
aatcctacgacccaggggcagaagtttgatcgcggcggcgcatttgttcgccactggcta
ccggcgctcgacgccgtgcccggcagcgcgctgcatgcgccctgggaatgggcggataag
caaggaatggtactggattatccccgcccgctcgttgatcataagcaggcgcgcgagacg
accctcgctgcgtatcaggcagcccgcaacaaggagtcatcacgatga
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