Janthinobacterium sp. B9-8: VN23_04400
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Entry
VN23_04400 CDS
T04271
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00061
Fatty acid biosynthesis
jab00071
Fatty acid degradation
jab01100
Metabolic pathways
jab01212
Fatty acid metabolism
jab02024
Quorum sensing
jab04146
Peroxisome
Module
jab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VN23_04400
00071 Fatty acid degradation
VN23_04400
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VN23_04400
09145 Cellular community - prokaryotes
02024 Quorum sensing
VN23_04400
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
jab01004
]
VN23_04400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jab04147
]
VN23_04400
Enzymes [BR:
jab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VN23_04400
Lipid biosynthesis proteins [BR:
jab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VN23_04400
Exosome [BR:
jab04147
]
Exosomal proteins
Exosomal proteins of breast milk
VN23_04400
Exosomal proteins of breast cancer cells
VN23_04400
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AMC33894
UniProt:
A0A0X8GKR5
LinkDB
All DBs
Position
complement(1000915..1002579)
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AA seq
554 aa
AA seq
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MEQAWWASYQLGVPREIDINEFAAIPAVLARSVARFGERPAFLNMGKSISYSELDQQSSA
FAAYLQHELKLPRGSRVAVMLPNLLQYPIAIFGILRAGMVVVNVNPLYTPRELSHQLKDS
GSVAIVILANFAHTLEEIISSSDVKHVLLTEIGDRLNFPKRQIVNAVVKHIKKMVPAFNL
PGHVRFNDALITGDTHKATPVDLNHSDIAFLQYTGGTTGVAKGAILTHGNIVANMQQAHA
WIAPLVNEGTEMIVTALPLYHIFSLTANCMVFSKIGATNLLITNPRDIPGFIKEIGKYPV
TCMTGVNTLFNALLNNAEFSKLDFSKWKLALGGGMAVQHAVADRWVKTTGVRLIEAYGLT
ETSPAAMMNPMNLPEFNGMIGLPVPSTIGEIRNEEGKALPPGEAGELFIHGPQVMAGYWQ
RPDETAKVLGKDGFVSTGDVAIMSPSGFFRLVDRKKDMILVSGFNVYPNEIEDVVASHPG
VLEVACIGVDDDKSGEAVKIFVVKKDPKLTQEDLIAHCRKNLTNYKIPRQVEFRDSLPKS
NVGKILRRELRPNK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcatggtgggcaagttatcaactgggcgttccccgggaaattgatatcaat
gaatttgccgcaatacctgcggtactcgcccgctctgtagcacgattcggagaacgaccc
gctttcctaaacatgggaaaatcaatcagctacagcgagctggatcaacagtcgtccgcc
tttgccgcctatttgcaacacgagctaaaactgccacgcggctcacgtgttgctgtcatg
ctgcctaatctattgcaataccccatcgctattttcggcattttgcgtgcaggcatggtg
gtggttaacgttaatccgctctataccccgcgcgagctcagccaccaattaaaagactct
ggctcagtcgccattgtcattctggccaactttgcccacacgcttgaagaaattatcagt
agcagtgacgttaaacatgtattgctgactgaaatcggcgaccggctgaattttcctaag
cggcaaattgtaaatgcggtggtcaagcacattaaaaaaatggtgcccgcctttaactta
ccagggcacgttcgttttaatgatgcactgatcactggcgacacgcacaaagccactccc
gtcgacttaaaccacagcgatattgctttcttacaatacacaggtggaaccaccggcgtt
gccaagggtgccatcctcactcacggcaatattgttgcaaatatgcaacaagcacatgct
tggatcgcccctctcgtcaacgaagggacagaaatgattgtcacggccctgccgctctat
catatcttttcactcacggccaactgcatggttttctccaaaattggtgccaccaatttg
ctgatcaccaacccgcgtgatatccccggttttattaaagaaatcggcaaatacccggtg
acctgcatgaccggcgtcaacacactattcaatgcgctactcaataatgctgaattttcc
aaacttgatttcagcaaatggaagcttgcccttggcggcggcatggccgtacagcacgca
gtagcagatcgctgggtaaaaaccacaggcgtgcgtttgattgaagcctatggcctcacc
gaaacatcaccagcggcaatgatgaacccgatgaatttacccgaattcaacggcatgatt
ggcttgcctgtaccctctacgattggcgaaatacgcaacgaagaaggcaaagctctgcca
cctggcgaagcaggcgagctatttattcatggcccgcaagtaatggcaggctactggcag
cgccctgacgaaaccgccaaagtgctaggtaaagacggctttgtcagcacaggggacgtc
gccatcatgtcgccaagcgggtttttccgcttagttgatcgcaaaaaagacatgatcctc
gtatcaggttttaatgtttacccgaacgaaattgaagacgtggtagcgagccatccgggc
gtgcttgaagtggcttgcattggtgtcgatgacgacaagtcaggcgaagcagtgaagatt
tttgtggttaaaaaagaccccaaactcactcaggaagacttgattgcgcattgccgtaag
aacctaaccaactataaaattccacgacaagtggaattccgagacagcctgcccaagtca
aacgtaggtaaaatactaagacgcgagttgcgccctaacaaatga
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