Janthinobacterium sp. B9-8: VN23_04425
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Entry
VN23_04425 CDS
T04271
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jab
Janthinobacterium sp. B9-8
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jab03016
]
VN23_04425
Enzymes [BR:
jab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VN23_04425
Transfer RNA biogenesis [BR:
jab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VN23_04425
Prokaryotic type
VN23_04425
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AMC33899
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All DBs
Position
1008279..1009196
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AA seq
305 aa
AA seq
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MAKRKIDGVLLLDKPFGISSNNALQKARWLLQAEKGGHTGVLDPFATGLLPLCFGEATKF
AQRMLEADKGYRATIKLGEVSTTLDGEGEITKSGDAPSDEALIRAAVNTFVGPIVQTPPM
YSALKVQGKALYEYAREGVVLERQSRQITIYSIDIISIEGDVLVIDVSCSKGTYIRVLAE
DIGKALGCGAYLTGLRRTRTAGFLLESSVNLDDYNHVPVEERDGFLLPADCLLLDLPALF
FDAAEFEKIRHGMTVERSGLLPGEYRLYAEGESRDNARFIGLGEVAASDENPHAWLRPKR
LLSGL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgaaagattgacggtgttttattgctggataagccttttggtatttccagt
aataacgctttgcaaaaagcgcgttggttgttgcaggcagaaaaaggcggccacactggc
gtgttagatccatttgcaaccggtttattgcctctgtgttttggtgaagccactaaattt
gcccagcgaatgttagaggccgataaaggctaccgcgcaaccatcaagctgggcgaagtt
tcaaccacgctggatggcgaaggtgaaatcaccaagagtggcgatgcaccgagcgatgag
gctttgattcgtgcggcagttaacacgtttgtcgggccgattgtccaaactccgccgatg
tattccgcgcttaaagttcaaggcaaggccttgtacgagtacgctcgtgaaggcgtggtg
ctcgagcgccagtcgcggcagattaccatctacagtatcgatattatttcgattgaaggt
gatgtgttagtgattgatgttagctgttcaaaaggcacatatattcgagtgctggcggaa
gatatcggtaaggctctggggtgtggggcttacttaacgggcctgcgccgtaccagaaca
gcaggttttttgttggaaagctcggtcaatttggacgattacaatcatgtgccggttgaa
gaacgtgatggctttttattgcccgcagattgcctgttgcttgatttgcctgccttgttt
tttgatgcggctgagtttgaaaaaattcgccatggcatgacggtagagcgttcaggtttg
ctgcccggcgagtatcgtctttacgccgagggggaaagcagggataatgcacggttcatc
ggtttgggcgaagtggcagcaagcgatgagaatccgcatgcgtggctgcggcctaaacga
cttctatctggtttgtaa
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