Janthinobacterium sp. B9-8: VN23_06085
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Entry
VN23_06085 CDS
T04271
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
jab
Janthinobacterium sp. B9-8
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jab03032
]
VN23_06085
03036 Chromosome and associated proteins [BR:
jab03036
]
VN23_06085
03400 DNA repair and recombination proteins [BR:
jab03400
]
VN23_06085
DNA replication proteins [BR:
jab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VN23_06085
Chromosome and associated proteins [BR:
jab03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
VN23_06085
DNA repair and recombination proteins [BR:
jab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VN23_06085
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
AMC37002
UniProt:
A0A109RWU3
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All DBs
Position
1365518..1365802
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AA seq
94 aa
AA seq
DB search
MTKSELIAKLAQRYPQLVAKDAELAVKTILDAMAKSLSQGQRIEIRGFGSFDLNYRPPRV
GRNPKSGTKVSVPEKFVPHFKAGKELRERVDALI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagcttattgcaaagctcgcccagcgttatccgcagctggttgcgaag
gatgcagagctggctgtgaaaaccatcttagatgcaatggccaagagcttgtctcaaggc
cagcgcatcgagattcgtggctttggcagttttgatctgaattaccgcccgccacgagtg
gggcgcaatccgaaatcaggtacgaaagtatcggttccggaaaaatttgtcccccacttt
aaagcgggtaaagagctgagagaaagggttgatgccctgatttga
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