Janthinobacterium sp. B9-8: VN23_07605
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Entry
VN23_07605 CDS
T04271
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab03420
Nucleotide excision repair
jab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VN23_07605
03430 Mismatch repair
VN23_07605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jab03400
]
VN23_07605
Enzymes [BR:
jab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VN23_07605
DNA repair and recombination proteins [BR:
jab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VN23_07605
MMR (mismatch excision repair)
Other MMR factors
VN23_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
NPHP3_N
AAA_22
AAA_12
AAA_11
Gp44-like_2nd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AMC34477
UniProt:
A0A0X8GKN9
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All DBs
Position
1686790..1688700
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AA seq
636 aa
AA seq
DB search
MHELEWDSEHQAIFNWLEHPDQHSSGLICARAGTGKTTTLVAAYKQLRSQGHSPLVLTFS
NSGRDTFIKRCRSHYPELPPPQAYTFDGYALRVFAQYSGRSRLRPRRQRPDVLANLIDLA
MNESIDILNDSLSEDEIRIPRDSQSLAMLHQFIDDAKVSLSFNTPPFALWGELDEEEDEY
DVDDALMRLGLSRQRYRLFKRFENARERLEFLAPGDAAFDLLREPEIIANDLKQLGIRWV
LVDEFHDTKPVHEQILRHIQAAGVRMLAVGDDAQDIYEWRGLTTFSAFKAWEAQSAPFGL
SRSFRFGRPLDQIASRLIKPLGSAIEVRSKASHYTRPKLRKVTMEADTSAILEDWQATGR
SLNECAILVREADASKPIEDALFKAGISYRMEGSRPYFLRQAALLCQAISYLASNKPAVH
DSSDVDAFLALIQSPAWEISEEQIANFHKELISTDHENKPLYRLDWLPDAYAILKGLIPA
PMAHLAFIRIKEEKTPLPLRLEELLDQLNLKPLVALSGPTARAAKARLQLFKTLIAELGK
IGPDALSKDWLKRRQRYQQFNKQRVVLSSVQQAKGREWAHVILPQLSDWTLREGADSANE
RRHFYVAITRSREYLSILGNEQSIQHSPWLGEIGIK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagttggaatgggatagcgaacatcaggccatttttaattggctggaacaccct
gaccagcactcgtccggcctgatttgtgcccgtgcaggcacgggaaaaaccaccacctta
gttgccgcctataaacagctacgcagccaagggcatagcccgctggtacttactttttct
aatagcgggcgagacacctttattaagcgctgccgcagccactatcctgaattacctccg
ccgcaagcctacacctttgacggctatgccctgcgagtgtttgcgcaatattccggcaga
tcaaggctaaggccccggcggcagcggccagacgtattggccaacttaattgacttagcc
atgaatgagtccatcgacatcctcaacgatagtctgtctgaagacgaaatacgtatccct
cgcgacagtcagtctttagctatgctgcatcagtttatcgacgatgcaaaagtaagtctg
tcatttaatacccccccttttgccctatggggggagctggatgaggaagaagacgaatac
gatgtagacgatgcgctgatgcgcttaggccttagccgccagcgctaccgattatttaag
cgctttgaaaacgcccgcgagcgattagaatttctcgcccccggtgatgcggcctttgat
ttactgcgtgagcctgaaatcattgccaatgatttaaagcaactcggcatacgctgggta
ctggtcgatgagtttcacgataccaaacccgtgcacgagcagattttgcggcatatacaa
gcagcgggcgtgcgcatgctggcagtgggcgatgatgcgcaggatatttacgaatggcgt
ggcctgactactttttctgcattcaaagcgtgggaggcgcaatccgcgccgtttggctta
tcacgttcttttcgctttggccgcccgctcgatcaaattgccagccgcctgattaaacct
ctaggcagcgctattgaagtacgctccaaagccagccactacacacggcctaaactgcgc
aaagtgacgatggaagccgataccagcgctattttggaagactggcaggccaccggccgt
agtcttaacgaatgcgccatcttagtgcgcgaagcggatgcctccaaaccgatcgaagac
gcgctatttaaagcgggcatcagctaccgcatggaaggcagccgcccgtattttttacgc
caagcggcgctgctttgccaagccataagctaccttgccagcaataaaccagccgttcat
gacagcagcgatgtcgacgcgtttctggcgctgatccaatccccagcatgggaaatcagc
gaggagcagatcgccaatttccataaagagctcatcagcaccgaccatgaaaataaaccg
ctctaccgcctagactggctacccgatgcttatgccattttaaaagggctgatccccgca
ccgatggcgcacctggcttttatcagaatcaaagaagaaaaaacacctttacccctgcgt
ttggaagaactccttgatcagctcaacttaaaaccccttgtcgccctcagtgggcccact
gcccgcgccgccaaagcccgtttacaactcttcaaaacactgatcgccgagctaggcaag
ataggcccagacgcacttagcaaagactggctgaagcgccgccagcgttatcagcaattt
aataagcaacgcgtggtactcagcagcgtgcaacaagccaaagggcgtgaatgggcgcat
gtgattttgccgcagctgagcgattggacactccgggagggcgcagattcggccaatgag
cgcaggcatttttatgtagccatcactcgctcacgcgaataccttagtattttgggtaat
gagcagagcattcaacacagcccctggctgggggagattggaattaaatag
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