Janthinobacterium sp. B9-8: VN23_09380
Help
Entry
VN23_09380 CDS
T04271
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab02010
ABC transporters
jab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VN23_09380
03070 Bacterial secretion system
VN23_09380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jab02000
]
VN23_09380
02044 Secretion system [BR:
jab02044
]
VN23_09380
Transporters [BR:
jab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VN23_09380
Secretion system [BR:
jab02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VN23_09380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_21
ABC_ATPase
AAA_22
SbcC_Walker_B
Zeta_toxin
AAA_16
AAA_30
PRK
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AMC34807
UniProt:
A0A0X8GLA6
LinkDB
All DBs
Position
complement(2073996..2076143)
Genome browser
AA seq
715 aa
AA seq
DB search
MSEKPLHTVIQCLAAIAQHHGLQINPERLIDEYALGNEEPGNPVLLRIANDIGLKARSDK
LTWAGLIAQGGVFPLIARTAFDHAVIVVGVRSDGEEGVKVALIDPMASQSAVILEDEATF
CNRWAGEVFFAKREHKLADPDQPFGLTWFLPEIAKQKSAFRDIFIAAIVMQFLSLASPIF
FQLVIDKVLTHQSLSTLWVLAAGIVLALLFDTAFGFLRQILTLAATNKIDMRLTRRVFGH
LLSLPIDYFESNSAGVVSRHMQQLEKIRSFLTGRLFFTALDLMSLLIFLPILFSYSGKLS
MIVLLFAALITCVVAAMVPTYQRRLNSLYSAEGQRQAMMVETIHGMRTVKALAIEPKQRR
TWDQLSAEAITLHFKVGQISIIGNAITDFLGKLLPVVVIVIGAQDVFDQTLTVGALIAFQ
MMSSRVVQPLIAIVGLVNEYQETALSVRMMGEVMNRPSEGRVGAGGLRPQLVGEIVFDEV
SFRYPGATATALNSASFTIPSGAVVGIVGRSGSGKTTVTKLIQGLYPLQGGIVRFDGMDA
REIELPHLRRQIGVVLQENFLFRGTVRQNLIVTKPDASFEEIVAAAEAAGADEFIERMPQ
GYDTMLEENASNLSGGQKQRLSIARSLLAKPRILILDEAASALDPESEAIFIRNLSKIAV
GRTVIMISHRLSTLVNAHTILVMQQGQLMDSGRHEELLTRCETYQHLWHQQTSHL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaagccactgcatactgtgatccaatgtttggcagccattgctcagcatcat
ggtttacagattaatcctgagcgtttgattgatgaatatgctttgggtaatgaagaaccc
ggtaatcctgttttattacgtattgccaatgatattggcctaaaggctagaagcgataag
ctcacctgggcaggcttaattgctcaaggtggggtgtttccactgattgcccgcacggca
tttgatcatgctgtgattgtggtgggggttcgctctgatggcgaggaaggggtgaaagtt
gccctgatcgatccgatggccagccaatctgcggtgatattggaagacgaggccacattt
tgtaatcgctgggctggtgaggtgttttttgccaagcgagagcataagctggcagaccct
gatcaaccctttggattaacctggtttcttccggaaattgccaagcaaaaaagtgctttt
cgcgatatttttattgccgcgattgtgatgcagtttttatcgcttgcgtcgccgattttc
tttcagctggtgattgataaagtgctgactcaccaaagcctgtctacactttgggtgctt
gccgcagggattgtgctggcgcttttatttgatactgcatttggttttttacgccagatt
ctgactttagccgcaaccaataaaatagatatgcggcttacccggcgtgtatttgggcat
ttactttctttaccgattgactattttgaaagcaattcggccggtgtggtttcccggcat
atgcagcagctggagaaaattcgtagttttcttactggccgattgttttttactgcgctt
gatttgatgtcattgcttattttcttgcctattttattttcgtattcgggcaaattatca
atgattgttttgttgtttgccgctttgattacctgtgtggttgcggcaatggtgccgacc
tatcagcgccgcttaaatagtctttattctgccgaaggccagcggcaagccatgatggtc
gaaactattcacggtatgcgcacggtaaaagcgctggcgattgagccaaaacagcgccgc
acttgggatcagctttcggctgaagccattaccttacattttaaagtggggcagatttcg
attattggtaatgcaattactgattttctaggcaaactcttgccggtggtggtgattgtg
attggtgctcaggatgtgtttgatcaaacgctgacagtgggtgcgctgattgcatttcaa
atgatgtctagccgggtggtgcagcccttgattgccattgttggtttggtaaatgaatac
caagaaaccgcgctatcggtgcgaatgatgggtgaggtgatgaatcgcccatcagaaggc
cgggttggggcaggcggtttacggccgcagctggtcggtgaaattgtgtttgatgaagtg
agttttcgctaccccggtgccactgccacggctttaaatagcgccagttttacgattcct
tctggtgcggtggtggggattgtggggcgcagtggctcgggtaaaaccacggtgaccaag
cttattcaaggtctttatcctttgcagggcgggattgttcgctttgatggcatggacgcg
cgtgaaattgaattgccgcatttacgtcggcaaattggcgttgtattgcaggagaacttt
ttgttccgtggcacggtgcggcaaaatttaattgtgaccaagcccgatgcctcatttgaa
gaaattgtagccgcagcagaagccgctggcgcagacgagtttatcgagcgtatgccgcag
ggctacgacaccatgctggaagaaaacgcatctaatttatccggcgggcaaaagcagcgt
ttatcgattgcacgctcgctgcttgcaaagccccgtattttgatactggatgaagcagcc
agcgcgctggacccagaaagcgaagcgatttttatccgcaacctatccaaaattgcggtg
gggcgaacggtgatcatgatttctcaccgcctctctaccttggtgaatgcacacactatt
ctggtgatgcagcagggccaactgatggatagcggccgccatgaagaactcttaacccgc
tgcgagacataccaacatctatggcatcagcaaacaagccacctgtag
DBGET
integrated database retrieval system
