Janthinobacterium sp. B9-8: VN23_09540
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Entry
VN23_09540 CDS
T04271
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VN23_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jab03400
]
VN23_09540
Enzymes [BR:
jab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VN23_09540
DNA repair and recombination proteins [BR:
jab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VN23_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMC34836
UniProt:
A0A0X8GM75
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All DBs
Position
2124357..2125196
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AA seq
279 aa
AA seq
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MSRRALILDELGLSPVWIRKDILAELQAAEPAPIRPASNAAPVPRPQGFSPVAVAAHQAL
APLVSSPKFTPPPVIAPANEPVEDERSKRISIMSWEELRSAVSSCTACALCQSRQKNGEQ
PVFGTGPMQPNIMVLGEAPDGDEEAQQTPFLGEAGRLLDNMLAAIGEEQQVYKANIIKCR
TPNKRNPQAAEVLQCAPFLKRQIELLQPKSLFVVGRFALKTLLETDEPVSALRENLHHYK
QIPLVVSYNPSYLLRNLPDKSRAWHDLLRLKASINKHPL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgggcgctgatactggatgagctgggccttagcccggtctggatacgcaaa
gatattctggctgagctgcaagcggctgagcccgctcccatccgcccagccagcaacgct
gctcctgtgcctcgtccgcaaggcttttcacctgtggcagtagcggcacatcaagcgctt
gcgccattagtgagctcgcctaaatttacgccgccgcccgttatcgctcctgctaatgag
ccggtagaagacgagcgatcgaagcgaatctcgataatgagctgggaagaattacgcagt
gcagttagcagctgtaccgcctgcgcactttgccaaagccgccagaaaaatggcgaacag
cctgtttttggcacggggccaatgcagccgaatattatggtactcggtgaagcaccggat
ggtgacgaagaagcccagcaaaccccgtttctaggtgaggcaggcaggctgctcgacaat
atgctggcagccatcggcgaagaacaacaagtttacaaagccaatattataaaatgccgc
acacccaataaacgtaacccacaagccgccgaagtcctgcaatgcgcgccgtttttaaag
cgccagatcgagctactccagcccaaatcattatttgtagtaggccgcttcgccctaaaa
acattgctagaaaccgacgagcccgtcagcgcactacgtgaaaatctacatcactacaag
cagattccgctggttgttagctacaaccccagctatctgctgcgtaacttaccagacaaa
tcccgcgcatggcacgatctgctgcgccttaaagcctcaatcaacaagcacccgctttaa
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