Janthinobacterium sp. B9-8: VN23_10010
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Entry
VN23_10010 CDS
T04271
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
jab
Janthinobacterium sp. B9-8
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Gene cluster
GFIT
Motif
Pfam:
GNVR
Vit_open_b-sht
Motif
Other DBs
NCBI-ProteinID:
AMC34920
UniProt:
A0A109RTJ5
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Position
complement(2228645..2230615)
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AA seq
656 aa
AA seq
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MIEIRSFRDIIRLFFIFKREFRWAFIATVVLIVLGAFLLPSRYVSESRLLVKPGRAMSTV
PIEYSDRQTLVAPSTQRDPIVDEEKMLTGRPIIRQVAEYYLNEVNDTSEKNGWKLIKFYI
KKGVGSIIDGVRSILVFIGISETQTPLDRLASKLEKQFTVVHEAGSSVMEISFTWDDPLI
AQRVVNKWIEVYQTERGKKLANDSLYGFYEVESQRIAEQIAANKTRISEKLKEIDGISSK
EKLESLTDRINRVSAQRAEAYAEQQGLEKSIMSASRRAGDLPQEVSKERELGLNPTQQDL
KLKLSGLVLERLDKLKNYQDQAPPILELNRSISALKERIAEEKESIQRSENRVPNELVTM
LKRSALERDTRVSELKAQMIAYDGELLKLKQERQRILSIDPELSGLERDLSVAEKNYRLY
IDSLEKARIDRELDNSRISNIAIIEQATFTPARVFPKSLMMLFMALPAGLAVGLFVVYLC
YLLDQRIHDGGRVKCHFGVPLWTTVMEQKDSALSASFEASIYRLYSQLPLATLKDQGLNI
GMTSSRHGEGVGFLIGQFQRILNERGIPNRMADDECAHPGEVVLIDASALLSNQAAFVRL
KQADLILLVVEARQSTVPMVENTLSILNTAFKKVDGIIINRRQFEISSGLLSRISR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatccgctcttttcgcgatattattcgcctgttttttatttttaaaagagag
tttcgctgggcttttattgctaccgttgttttgattgtcttgggggcttttcttttgcct
tcccgctatgtttctgaatcgcgtctgctcgtgaagcccggtagggcgatgagcacggta
ccgattgaatatagcgatagacaaacactggttgctcccagcacccagcgtgacccgatc
gttgacgaagaaaaaatgctaactggccggccgattatccggcaagtcgctgaatattat
ttaaatgaagtgaacgacacttctgaaaaaaatggctggaaactgattaagttttatatc
aaaaaaggcgtgggcagcatcattgatggtgtgcgctctattttggtatttattggtatt
tctgaaacgcaaacgcccttggatcgtttagccagtaaattagaaaagcaatttaccgta
gtgcatgaggcaggctcatcggtaatggaaatcagctttacctgggatgatccattgatt
gcacagcgggtggtcaataagtggatagaggtttatcaaactgagcggggtaaaaaatta
gccaatgacagcctttatggtttttatgaagtagaaagccagcgtatcgctgagcaaata
gcggctaataaaaccagaatttctgaaaaattaaaagagattgatggcataagcagtaag
gaaaaattagaaagcctgaccgatagaattaatagagtatcggcacagcgggcggaagct
tatgctgagcagcagggtttagagaaaagcataatgagtgccagccgcagggcgggcgat
ttgccgcaggaagtcagcaaggagcgtgagctgggtttaaatcctactcagcaagattta
aagcttaaattaagtggtttggtattagagcgcttagataaattaaaaaattatcaagat
caagctccgccgattttggagcttaatcgcagtattagcgcgcttaaagagcgtattgcc
gaagaaaaagaaagcatacagcgctctgaaaatcgcgtacctaatgaattagtcactatg
ctaaagcgctcagcactagagcgtgatacgcgggtgagtgagctaaaagcgcaaatgatt
gcttatgatggggaattattgaagcttaaacaagaaaggcagcgcattttatctattgat
ccggagctatctggtttagagcgtgatttatcagtagcagagaaaaattatcggctttat
atcgatagcttagaaaaagctcgtatcgatagagaattagataatagccgcatcagcaat
attgccattattgagcaagctacttttacccctgcgcgggtttttcctaaaagcttaatg
atgttgtttatggcgctgccagcaggtttggctgtgggcttatttgtggtgtatctctgc
tatttattagatcagcgtattcatgatggcggcagagtaaagtgccattttggcgtgcct
ttatggacgacggtgatggagcagaaagacagcgctttatccgcatcttttgaagcaagt
atttaccggttatatagccaattgcccttggcaacgcttaaagatcagggcttgaatatt
ggaatgacttcttcacggcatggcgaaggggttgggtttctgatcggccaatttcagcgt
attttgaacgagcggggcattcctaatcgcatggccgatgatgaatgtgctcatccgggc
gaagtggttttgattgatgcatcggccttattaagtaaccaggctgcttttgttcgcctt
aagcaggccgatttaattctattggtggtcgaggctaggcaatccacggtgcctatggtt
gaaaatacgctgtctattttgaatacggcgtttaaaaaagtagatggcattattattaat
cgtcggcaatttgagatttcctccggattactcagccgtatttctcgctaa
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