Janthinobacterium sp. B9-8: VN23_11250
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Entry
VN23_11250 CDS
T04271
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00260
Glycine, serine and threonine metabolism
jab00270
Cysteine and methionine metabolism
jab00450
Selenocompound metabolism
jab00670
One carbon pool by folate
jab01100
Metabolic pathways
jab01110
Biosynthesis of secondary metabolites
jab01230
Biosynthesis of amino acids
Module
jab_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VN23_11250
00270 Cysteine and methionine metabolism
VN23_11250
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VN23_11250
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VN23_11250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jab04147
]
VN23_11250
Enzymes [BR:
jab01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
VN23_11250
Exosome [BR:
jab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VN23_11250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
OpcA_G6PD_C
Motif
Other DBs
NCBI-ProteinID:
AMC35145
UniProt:
A0A109RTQ7
LinkDB
All DBs
Position
complement(2526704..2527849)
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AA seq
381 aa
AA seq
DB search
MSTFETLAVISGLHRDPLGAINTPIYASSTFRQPSPGQPDQYEYSRSSNPTRDAFEVAIA
ALEGGTRGYAFASGMAAITTVLELLPVNSHLVAVDDLYGGSGRLFEKVKQRTAGLTVTYV
PTGDLEALQAAIKPETKMIWIETPSNPLNRLSDLSAIVAIAKAHSLLTVADNTFASPALQ
RPLEHGVDIVLHSATKYLNGHSDVIAGAVVVGENSELAEQLGFLQNAIGAVLDPFQSFLA
LRGIRTLAIRMERHNHNALRIAQWLEQHPRVERVLYPYLESHPQYALAKAQMAGGGGVVS
FYLKGDDADVHQVLTHTKLFTLAESLGGVESLISQPVRMTHASVPAERRAKLGISDNLIR
LSVGIEGLEDLLADLEQALAA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatttgaaacgcttgctgtcatcagcggcctgcatcgcgatccactgggtgca
atcaataccccgatttacgcctcgtccactttccgtcagccatcccccggtcagccggat
cagtatgaatattcgcgctccagtaatccaacgcgcgatgcttttgaagtagcgattgcc
gctttagaaggcggcacgcgtggctatgcttttgcatcagggatggccgccattactacg
gtattagagctgttgccggtaaatagccacttagtggcggtagatgatttatatggtggc
agcgggcgtttatttgaaaaagtaaaacagcgtaccgcaggcttaacagtcacttatgtg
ccgactggcgatctggaagcgctgcaagcggccatcaagccagaaactaaaatgatctgg
attgaaacgccgtccaatccgctgaatcgcctgagtgatttaagcgccattgtggcgatt
gccaaggcgcacagcctgcttaccgtggccgacaatactttcgcttcgcctgctttgcag
cggccgctggagcatggtgttgatatcgtgctgcattcggcaaccaaatatttaaatggt
cattctgacgtgatcgccggtgcggtggtggtgggagagaacagcgagctagccgagcag
ctgggctttttgcaaaatgccatcggcgcggtgctcgacccatttcaaagctttttagcg
ctgcgaggcatacgcacgctggcgatccgtatggagcggcataatcacaatgccctgcgc
attgctcagtggctggagcagcatccgcgcgttgagcgcgttttatacccttacctagaa
agccatccgcaatatgcactggccaaagcgcaaatggcaggcggtggtggggtggtgtcg
ttttatctgaaaggggatgacgccgatgtgcatcaagtgctgacgcataccaagttattt
accctggcagaaagcctaggcggtgtagaaagcctgatcagccagcctgtgcgaatgacg
catgcttcggtgccggcagagcgccgcgctaaattaggaattagcgataatttgattcgc
ctgtcagtggggattgaaggccttgaagatttgcttgctgatttagaacaagcgttggcg
gcttag
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