Janthinobacterium sp. B9-8: VN23_13190
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Entry
VN23_13190 CDS
T04271
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00300
Lysine biosynthesis
jab00470
D-Amino acid metabolism
jab01100
Metabolic pathways
jab01110
Biosynthesis of secondary metabolites
jab01120
Microbial metabolism in diverse environments
jab01230
Biosynthesis of amino acids
Module
jab_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VN23_13190
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VN23_13190
Enzymes [BR:
jab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VN23_13190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AMC35500
UniProt:
A0A0X8GNH5
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All DBs
Position
2924979..2926211
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AA seq
410 aa
AA seq
DB search
MISNCQIAQIADQFSTPCWAYDAATIRAQIARLRQFDVIRFAQKASSNIHLLKLMREEGV
LVDSVSLGEVERALAAGFVPDSHAKHAPIVFTADLLDKKALARVVELNIPVNCGSPQMLE
QLGQAHAGHSVWLRINPGFGHGHSRKTNTGGEQSKHGIWFKHLAESLALIAQYKLKLIGL
HMHIGSGVDYDHLQSVCDAMIAQVKTCAQDLSAISIGGGLSIPYQVGDAIVDTDHYFQIW
DKARQEIETHLGHKISMEIEPGRFLVAQSGCLISELRAQKQVGSNFFALVDAGFNDLARP
AMYGSYHRISSYAPDGSPRSGALRPTVVAGPLCESGDVFTQIEGGEVTTQDLPSCEIGDL
LVFHDTGAYGASMSSNYNSRPLIPEVLVDGDQITQIRRRQTVQELIALEM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaattgccagattgcccagattgccgaccaattttctaccccttgctgggcc
tatgatgcggcaaccattcgggcacaaattgctcgtctgcgtcaatttgatgtgattcgc
tttgcgcaaaaagcctccagcaatatccatttactcaaactcatgcgtgaagaaggcgtg
ctggtagattcagtttcgctgggcgaagtcgagcgtgcgctggcggcaggctttgtacct
gatagccatgccaaacatgcgccgattgtttttaccgccgatcttttagataaaaaagca
ctggcgcgcgtggttgagctcaatattccggtgaactgtggctcgccacaaatgctagaa
caactagggcaagcgcacgcgggtcattcagtttggctacgcatcaaccccggctttggc
cacgggcacagccgtaaaaccaataccggtggcgagcaaagtaagcatggcatctggttt
aagcatttagcagaaagcctagcgctgatcgcccagtacaaactcaagctcatcggcctg
catatgcatattggttcgggcgtcgattacgatcatttgcaaagcgtttgcgatgcaatg
attgcccaggtaaaaacctgcgctcaggatttatcagcgatttcgattggcggtggctta
tcgattccctaccaagtaggggatgcgattgttgataccgatcattacttccagatttgg
gataaagcgcgtcaggaaattgaaacgcatttaggccacaagatcagcatggaaatcgaa
cctggccgctttttagtggcgcaatcgggctgcttgatttctgaactacgcgcgcaaaaa
caagtggggagcaacttctttgccttggtcgacgcaggctttaatgatctggcccgccca
gcaatgtatggcagctatcaccgcatcagcagctatgcaccggatggctcgccacgcagc
ggcgcacttcgccccaccgttgtagccgggcctttatgcgaatcaggcgatgtatttacc
cagattgaaggcggggaagtcactactcaggatttaccaagctgcgagataggcgatttg
ctggtgtttcacgacaccggcgcatacggcgccagcatgtcgtccaattacaactctcgg
ccattaatccctgaagtgttagtcgatggcgatcaaatcacccaaatccgccgccgccaa
acggtgcaggaattgattgcgctggaaatgtaa
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