Janthinobacterium sp. B9-8: VN23_14955
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Entry
VN23_14955 CDS
T04271
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab03030
DNA replication
jab03430
Mismatch repair
jab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VN23_14955
03430 Mismatch repair
VN23_14955
03440 Homologous recombination
VN23_14955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jab03032
]
VN23_14955
03400 DNA repair and recombination proteins [BR:
jab03400
]
VN23_14955
Enzymes [BR:
jab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VN23_14955
DNA replication proteins [BR:
jab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VN23_14955
DNA repair and recombination proteins [BR:
jab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VN23_14955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AMC35814
LinkDB
All DBs
Position
complement(3333253..3334665)
Genome browser
AA seq
470 aa
AA seq
DB search
MNNPYFSYPLVLVDLETTGANPNSDRITEVGIVQIDEQGSRSWSQLVNPGKEIPEFIQEL
TGISNEMVADAPPFADVAEQVLELLQGRVFVAHNARFDYGFLKQEFKRLNMRLQAQVLCT
VKLSRKLYPTEHKHSLDALIARYGLTFVGGRHRALTDAELLQQFLDVALKDHGFEALHQA
IAELLRQPALPPALDPVQIDELPESSGVYIFYGSDDVALYIGKNHNIRKRVLAHFSDANP
KEVQLAKRTQRLAWHETSGELGAVLLETSLVSQLEPSYNPPQRRIKELGGWRLVSKDDVL
QPYWTPWTEVGSEPVFGPFRSRREAANVLNKMIDGHGLCRQILGLEPKPKSLAPCSAFLE
NRCRGACVGRDITHNARFSAAIERYRFPLWPYKGAVALAEGPEWAPVLQVFDQWCYLGAI
NHIDELPALMAKPRKFELDVFKLIQKEFKKQGHKLQKLGRGSGAESQKDL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatccctatttttcctatcctctcgttctggttgatttagaaaccaccggagcg
aacccgaattcggatcgtattaccgaagtgggcattgtgcagatcgacgaacagggcagc
cgtagctggtcgcaactggtgaatcctggaaaagagattcctgagtttattcaggagttg
accggcattagcaatgaaatggtcgccgatgcgccaccctttgccgatgtggcggagcag
gtactagagctattacaggggcgggtgtttgtcgcgcataacgcgcgttttgattacggg
tttttaaagcaagaattcaaacgcctcaatatgcgtttacaggcgcaggtactgtgtacc
gttaagctgtcacgcaagctttaccctactgagcataagcatagcctggatgctttgatt
gcacgttacgggctgacctttgttggtggtcgtcaccgtgctctcaccgatgcggagctt
ttgcagcagtttctggatgtggcgctgaaagatcacggctttgaggcgctgcatcaggcg
attgccgaattgttacgtcagcctgccttgccgcctgcgctggaccccgtccagattgat
gagttgcctgagtcttccggcgtttatattttttacggctcggacgatgtggcgctttat
atcggcaaaaatcacaatatcagaaagcgcgtactggctcattttagtgatgccaatcct
aaggaagtgcagctggctaagcgtactcaaaggctggcctggcatgaaacatcgggcgag
ttaggtgcggtgctactggaaaccagtcttgtttcccaattagagccaagctacaacccg
cctcagcgacggattaaagaactaggtgggtggcgcttagtctcgaaagacgacgtacta
cagccctattggacgccgtggaccgaggtgggcagcgagccagtattcggcccgttccgt
tcgcgccgcgaagccgccaatgtattaaataaaatgattgatggtcatggactttgtcga
cagattttggggctagagcctaagcccaagtcgcttgcgccttgctcggcattcttagaa
aaccgttgtcgaggtgcctgtgtggggcgcgatatcactcataacgcccgcttttctgcc
gcaatagagcgttatcgctttccgttgtggccctacaagggggcagttgctctggcagaa
ggccctgaatgggcaccagtgttacaggtgttcgatcaatggtgctatctgggtgcgatc
aaccacattgacgagctgcccgccctaatggccaagccacgtaaatttgaactggatgtg
tttaagctgattcagaaagaattcaaaaagcagggacataaattgcagaagcttgggcgt
ggtagcggggcagaaagtcaaaaagatctgtag
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