Janthinobacterium sp. B9-8: VN23_15860
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Entry
VN23_15860 CDS
T04271
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
jab
Janthinobacterium sp. B9-8
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jab03400
]
VN23_15860
Enzymes [BR:
jab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VN23_15860
DNA repair and recombination proteins [BR:
jab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VN23_15860
Prokaryotic type
VN23_15860
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMC35965
UniProt:
A0A0X8GPE3
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All DBs
Position
3500907..3502292
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AA seq
461 aa
AA seq
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MTSLVWFRRDLRLFDHAALHHALKASPNVIAVFIFDTAILDGLSKEDRRVAFIWHSLQQL
KTALIEQGSDLIIRHGVASDEIPRLAAEFKATAVYCNHDYEPAAISRDLSVAEQLAANDC
RFYSFKDQVIFEKDEVLTKTGGMYSVFTPYKRAWLAKVNDFYLKSYPVRPYLNRLAPLSG
EAMPTLAELGFDEIDVSNLKPGMDGGEALFDDFCQRIGDYQEARDFPAVKGLSYLSVHLR
FGTVSIRELAKRAWQIGGGGAETWLSELIWREFYQQILWHRPEVVQHAFKPEYDTLPFPN
NAEYFAAWCEGRTGFPIVDAAMRQLNQTGFMHNRLRMIAASFLVKDLLIDWRWGERYFAE
KLNDFDLSANNGGWQWAASTGCDAQPYFRIFNPVTQSERFDPQGKFIRRYCPELAALSHK
EIHAPWLVKAIFGQKASYDYPPPIVDHAVQRLAALALYKRN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactcgtttggtttcgccgcgatctgcgcttatttgaccacgcagcactgcat
cacgccttaaaagcatccccaaacgtgatcgcggtatttatttttgatactgccatttta
gatggattatcaaaagaagaccgacgcgtggcttttatttggcatagcctgcagcaatta
aaaacagcgctgattgagcaaggctcggatttaatcattcgccatggcgtagccagcgat
gaaattccccgcctggcggcagaattcaaagccacagcagtttactgcaaccacgattac
gagccagcagccattagcagagatctcagtgtagccgagcaattggccgctaatgactgc
cgcttttacagtttcaaagatcaggtcatttttgaaaaagacgaagtactcactaaaacc
ggcggcatgtatagcgtattcaccccgtataaacgcgcatggctggctaaagtgaatgac
ttttatttaaaatcctaccctgtgcggccttatttaaaccgccttgcgcctctgagcggt
gaagcaatgcccacactggcagagctgggctttgatgaaatcgatgtaagtaatcttaaa
cccggtatggatggtggcgaagcactgtttgatgacttttgccagcgcatcggtgattac
caagaagcgcgggattttccggcagtaaaaggcttgtcttatttatctgtgcatctgcgc
tttggcacggtatcaatcagagaattagcaaaaagagcctggcagattggcggtgggggg
gcagaaacatggctttccgagctgatctggcgcgagttttaccagcaaatcctctggcat
cggcccgaagtcgttcaacatgcatttaagcccgaatacgacacactgccgttcccgaat
aatgcagagtactttgccgcatggtgcgaaggccgtacggggtttccaattgtggatgcc
gccatgcgccagttaaatcaaaccggctttatgcataatcgcctgcgcatgattgccgcc
agctttttagtcaaagacttactcattgactggcgatggggcgagcgctattttgccgaa
aaactcaatgattttgacttgtccgccaataatggtggctggcagtgggccgcatccacc
ggctgcgatgcccagccttatttccggatatttaatcctgtaacgcaatcggagcgcttt
gatccgcagggtaagtttatccgccgctattgccccgagctggcagcgctcagccataaa
gaaatccacgcgccatggttggttaaagctatttttgggcaaaaagccagctatgactat
cccccaccgattgttgaccatgcagtacaacgcctcgctgcactggctttatataaacga
aactaa
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