Janthinobacterium sp. B9-8: VN23_16205
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Entry
VN23_16205 CDS
T04271
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00470
D-Amino acid metabolism
jab00550
Peptidoglycan biosynthesis
jab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VN23_16205 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VN23_16205 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jab01011
]
VN23_16205 (murD)
Enzymes [BR:
jab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VN23_16205 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
jab01011
]
Precursor biosynthesis
Amino acid ligase
VN23_16205 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
Pyr_redox_3
XdhC_C
KR
Shikimate_DH
Pyr_redox_2
AdoHcyase_NAD
TrkA_N
2-Hacid_dh_C
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AMC36032
UniProt:
A0A120II48
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All DBs
Position
3586946..3588331
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AA seq
461 aa
AA seq
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MNYQGKHCIVVGLGESGFSAAKWLAAQGARVTVADSRSAPPNVEQLHAAHADIELRLGAF
SDATFVDADALIVSPGVPLATPAITAAVARGVPALGDVELFAQAISGSAAKVIAITGSNG
KSTVTSMVGQMCDAAGLKTVMAGNIGLPVLDALTARPDADVFVLELSSFQLETTTSLNAD
AATVLNISEDHLDRYKNLAHYAATKAAIFAGTGVVVLNREDTHCLAMATKLESRHIVWFG
ADEPRAANEYGLKGSEFTLSYGSEAFFNAADLPVAGLHNAVNALSAIALCRAIGLETAPL
LAALKSFTGLAHRVEFVATVQGVDYFDDSKGTNVGATEAALKGMTRPVVLIAGGDGKGQD
FRPLKAACERICRAVILIGRDAPILAEALNEAQSQFVDFDNEHLLPILQLPTMEMAVQFA
SNFAESGDVVLLSPACASLDMYRNYHHRAEVFIAAVKGLGA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccaaggcaaacattgcatcgttgtgggtttaggcgaatcgggcttttctgct
gctaagtggctggccgctcagggtgcgcgcgtgactgtggccgacagccgcagcgctccg
ccgaatgtagagcaactccatgccgctcatgccgatatcgaattgcgcttaggcgcgttc
agcgatgccacgtttgttgatgccgatgcgctgattgttagccccggcgtgccgcttgcc
acgccagccattactgcggctgtcgcccgtggtgtgcctgccttaggtgatgtggagtta
ttcgcccaggcgatttccggctctgccgctaaagtgattgcgattaccggctccaacggc
aaatcaaccgttaccagcatggttggccagatgtgcgacgccgcgggcttaaaaacagta
atggctggcaatatcggcctgccagtgcttgatgcactcacagccagaccggatgccgat
gtgtttgtgctggagctttccagctttcagctcgagaccaccacctcgctcaatgcagat
gcggcaacggtactcaatatcagcgaagaccatttagaccgttataaaaatctggcgcat
tacgctgccaccaaggccgccatctttgcaggcacaggcgtcgtggttctaaaccgtgaa
gacacgcattgccttgctatggcaactaagctggaatcccgccacatcgtctggtttggt
gctgatgagccgcgcgcagcaaatgagtacggcctgaaaggaagtgaattcactttaagc
tacggtagcgaagcattctttaatgcggccgatctgcctgtagctggcttacacaatgca
gtcaatgcactttccgccatcgcgctttgccgtgccattggcttagaaaccgccccgctg
ctcgccgcactgaaatcattcacgggccttgcgcaccgggttgagtttgttgccacggtt
caaggcgttgattactttgatgattccaaaggcaccaatgtaggcgccaccgaagcggca
ctcaaaggcatgactcgccctgtggtgttgattgccggaggggacggcaaggggcaggat
tttcgcccgcttaaagctgcttgcgagcgcatttgccgtgcggtgattctgattggccgc
gacgcgccgattctggccgaggcgctcaacgaagctcaatcgcagtttgtagatttcgat
aacgaacatctgctgcctattttgcaactgcccaccatggaaatggccgtgcaatttgcc
agcaactttgccgaaagcggtgatgtggttctgctttccccagcttgcgccagcctagat
atgtaccgcaactatcaccaccgcgccgaagtatttatcgctgcggtaaaaggtctgggg
gcctga
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