Janthinobacterium sp. B9-8: VN23_18130
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Entry
VN23_18130 CDS
T04271
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab03030
DNA replication
jab03410
Base excision repair
jab03420
Nucleotide excision repair
jab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VN23_18130
03410 Base excision repair
VN23_18130
03420 Nucleotide excision repair
VN23_18130
03440 Homologous recombination
VN23_18130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jab03032
]
VN23_18130
03400 DNA repair and recombination proteins [BR:
jab03400
]
VN23_18130
Enzymes [BR:
jab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VN23_18130
DNA replication proteins [BR:
jab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VN23_18130
DNA repair and recombination proteins [BR:
jab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VN23_18130
NER (nucleotide excision repair)
GGR (global genome repair) factors
VN23_18130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AMC36370
UniProt:
A0A0X8GQ23
LinkDB
All DBs
Position
complement(4014687..4017473)
Genome browser
AA seq
928 aa
AA seq
DB search
MATLLLIDGSSYLYRAFHAIRDLAAPDGTPTNALYGFVNMLKKLRQQTPADYIACVFDAK
GKTFRDDLYSEYKAHRPSMPDELRVQIAPIHAAVKAFGIKILMVDGVEADDVIGTLASWG
TEHGITTIMSTGDKDMAQLVNQYVRIENSMTEEVLDIEGVINKFGVRPEQIVDYLALIGD
TVDNVPGVPKCGPKTAKKWLDEYQTLDAVMANAAAIKGVVGENLRNTLEWLPMAKQLVTI
KCDLDLSSELPQQFADLVPQSEDWDTLLGIFRLANFRSWIREAESKAAAASIPAPANDDL
FSLVASNGPITEAESIAPIIDSPAELTPAPRNYQTILSDTELDDWLAQLMAASVVSLDTE
TTGLDALNSQIVGMSFCISEGHAAYLPLAHRGPDAVDQLPLDATLAKLKPWLESANHKKL
GQNLKFDQHIFANHGIALAGVEDDTLLMSYVLASHEKHSMDAQAERELGVTTIKFEELCG
KGAKQIGFDEVAVDIASVYAAEDADITLQLAHALLPRLTGGLAHVYREIEMPSRSILFEM
ERTGVLLDSQKLNQQSHEIGLRLLALEQNAYDLAGQPFNLSSPKQIGEIFFEQLKLPVIK
KTPKGAPSTDEEVLQELAKDFPLPKVLLEHRSLSKLKSTYTDKLPLMVNPRTGRVHTSYN
QTVAITGRLSSSEPNLQNIPVKSMEGRKIREAFIAPKGWQIMSADYSQIELRIMAHLSGD
EAMIAAFNSGEDIHRTTAAEVFAVALDQVSSEQRRYAKSINFGLIYGMGVFGLAAQLEIP
RDAAKNFIDRYFARFNGVAQYMENIRASAKEYGYVETVFGRRLWLPEIKSANAARRAGAE
RAAINAPMQGTAADLIKLAMINVADWIKTEGLQSRLIMQVHDELVLEVPDSEVEMMREQL
PLKMSAAAKLTVPLLAEVGVGLNWEEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgcttttaattgacggctcctcctacctctaccgagccttccatgcgatc
cgcgatctggcagctccagacggcacgcccaccaatgctttgtacggctttgttaatatg
ctgaaaaagctgcgccagcaaacaccagccgattatatcgcctgcgtatttgatgccaaa
ggcaaaaccttccgcgacgatttatacagcgaatacaaggcgcatcgcccatctatgccc
gatgaattgcgtgtgcaaattgcaccaattcacgccgcagtgaaagcatttggtatcaag
atactgatggtggatggtgtagaagctgacgatgtgattggtacacttgcaagctggggt
acagaacacggtattactaccattatgtcgaccggcgataaagatatggcacagctggtt
aatcaatatgtgcgtatcgaaaactcgatgaccgaagaagtgctcgatatcgaaggcgtc
atcaataaatttggcgtgcgccctgagcaaattgtcgattacctcgctctgattggcgat
accgttgataacgtgcctggcgttccaaaatgcgggccaaaaaccgcgaaaaaatggctc
gatgagtaccaaacactcgatgccgtgatggccaatgccgccgcaattaaaggcgtagtg
ggtgagaatttacgcaacacactagaatggctgccgatggccaagcagctggttaccatt
aaatgtgatctggatttaagcagcgagctgccacagcaatttgccgatctggtgccgcag
agcgaagactgggacacgctgctggggatattccgactagccaatttccgcagctggata
cgcgaagcagaaagcaaagccgctgctgcttccattccagccccagcgaacgacgattta
ttcagtttggtcgccagcaacggtcccattaccgaagcagaaagcatcgcccccatcatc
gactcgcctgccgagctcacgcctgccccacgcaactatcaaaccattctgagcgatacc
gagctagatgactggctagcgcagctgatggccgcttcagtcgtgtcgctcgataccgaa
accacgggtctggatgctttaaactcgcaaattgtcggcatgtcgttttgcataagtgaa
ggccatgcagcctatctgccgctcgctcaccgcgggccagatgcggtcgatcaactaccg
ctggatgccacactagccaagcttaaaccttggctagaatcagccaaccataaaaaactc
ggtcagaatttaaaattcgaccagcatatttttgctaatcacggcattgcactggcgggg
gtcgaagacgataccctgctgatgtcttacgtgttggccagccacgaaaaacacagtatg
gatgcgcaagcggagagagagctgggcgttaccacgattaaatttgaagagctgtgcggc
aagggcgctaagcaaattggctttgatgaagttgcggtcgatatcgccagcgtttacgcc
gccgaagatgctgacattaccttgcaactggctcacgctctgctgccgcgcctgacgggt
gggctggcgcatgtttaccgtgaaatcgaaatgccatcgcgcagcatcttgtttgaaatg
gagcgcactggtgtgttgctcgatagccagaaactcaatcagcaaagccatgaaattggc
ctgcgcttactggcactcgagcaaaatgcttacgatttagcggggcagccattcaatcta
tccagccccaagcaaattggcgaaattttctttgagcagctcaagctgcccgtcatcaag
aaaacccccaagggcgcaccatctactgatgaagaagtgttgcaagaactagcaaaagac
ttcccgctgcccaaagtgctgctcgaacaccgttcactatccaaactgaaatcgacttac
accgataagctaccgctgatggtcaacccacgcactggccgcgtgcataccagctacaac
caaaccgtggcgattacggggcgcttaagctctagcgaacctaatctgcaaaatatcccg
gtaaaaagcatggaaggccgcaagattcgcgaagcctttatcgcaccaaaaggctggcaa
atcatgtcggccgattactctcaaatcgagctacgcatcatggcgcacctatctggcgat
gaggccatgattgccgcatttaattccggcgaagatatccaccgcaccaccgccgccgaa
gtgtttgccgtggcgctggatcaagtcagcagcgagcagcgccgttacgccaaaagcatt
aactttggcctgatttacggcatgggcgtatttggccttgctgcccagctggaaatcccg
cgcgacgccgccaaaaactttatcgaccgctactttgcacgcttcaacggtgtagcccaa
tatatggaaaacatccgcgccagcgccaaagaatacggctatgtagaaaccgtctttggc
cgacgcctctggttgccagaaataaaatctgccaacgctgcccgccgtgcaggcgcggaa
cgtgcggccattaatgcccccatgcaaggcacggcagcagatttaattaaactagccatg
attaatgtggcggactggattaagaccgagggcttgcaaagccgtttaattatgcaagta
cacgatgagctggtgctggaagtccccgattcagaagtcgaaatgatgcgggaacaatta
ccgcttaaaatgtcggcagccgccaagctcaccgtgcccttacttgcagaagtaggtgtt
gggctgaactgggaagaagctcattaa
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