Janthinobacterium sp. B9-8: VN23_18150
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Entry
VN23_18150 CDS
T04271
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VN23_18150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jab02000
]
VN23_18150
02044 Secretion system [BR:
jab02044
]
VN23_18150
Transporters [BR:
jab02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
VN23_18150
Secretion system [BR:
jab02044
]
Type I secretion system
Adhesin protein transporter
VN23_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AMC36374
UniProt:
A0A109RW95
LinkDB
All DBs
Position
4020495..4022678
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AA seq
727 aa
AA seq
DB search
MSESNPSHFKATERPDWRVGEHQSRFDPLLDCLAELTRIHGSPWTCEALSAGLPLTDNLL
SPSLVPRAAARAGLSARVVRRSLQELPTSLFPVILLLKDRGACLLLEWAEAGLARVCFPE
TGESSELIDAETLAESHNGIVIFVRPKFRFETRAPEHGSVRSRHWFWGVVQDNWRLYRDA
LLAALLINLLALAMPLFSMNVYDRVVPNHALETLWVLAIGALAVLCFDFILRTIRGHIID
VASKRIDVTLSALIMERVLGLRMEARPASVGSFVANLRAFESVRDFIASASITTLVDLPF
VLIFLLVMVWISPWLAVPAMVGIVLVVVFTLLAQDKMQEMVELTQRASAQRNATLVEGLV
GIETIKVMGAESEFQRRWERSTHFLAQVGSKLKLLSSTTVNFASLISQLVSVVVIIVGVY
LLTENMVTMGGIIAASMLSGRALAPLGQVAGLLMQYQNARTSLAGIESHMKLPVERPADS
NFLHRESFRGDIEFKNVSFGYAGSDEKVLNNVSFKLKAGEKMAIIGRIGSGKTTIEKLIL
GLYYPTEGAVLIDGVDTRQIDPAELRRAIGHVPQEPILFYGTLRQNIAMGAPFADDASIL
AAAELAGVKEFSDLHPRGFDMLIAERGDSLSGGQRQTVSIARAMLNDPPMLLLDEPTSAM
DHLSEEKLKARLKAYVMQKTLLLVTHRTSLLDLVDRLIVLDQGQVVADGPKAQVIEALQQ
GRIGRTS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtccaatcccagccattttaaagcgactgagcgtcctgactggcgtgtgggt
gaacatcagagtcgttttgatccccttctagattgtttagccgagctaacacgcattcat
ggcagtccgtggacctgtgaggctttgtccgcaggtttgccgctgacagataatttattg
tcgccttccctcgtgccgcgtgctgcggcccgggcgggtttgtctgcccgcgtggtgcgc
cgttccttacaggaactacctaccagtctgttccctgttattttgttattaaaagatcgt
ggtgcttgcttattgctagagtgggccgaagcaggactggcccgcgtttgctttccggaa
acgggtgaatcctctgagctgattgatgcagaaacattggccgaatcgcataacgggatt
gttatttttgtccggcctaaattcaggtttgaaacgcgcgcacccgagcatggctcggtg
cgtagccgtcactggttttggggggtggtgcaggataactggcgcttatatcgtgatgcc
ctgctggccgctttgctgattaatcttttggctttggctatgccgctgttttccatgaac
gtatacgaccgagtggtccccaatcatgcactggaaacgctgtgggtgttggcgattggc
gcattggccgtattgtgctttgattttattttgcgaacgattcgcggccatattattgat
gtggcatccaagcgcattgatgtcaccttatctgccttgatcatggagcgggtcttgggt
ctgcgtatggaggcacgtcctgcatcggtgggctcatttgtggctaatttgcgggcgttt
gaatcggtgcgtgatttcatcgcctcggcgtcgattaccaccttggttgatttacctttt
gtgctcattttcttgctggttatggtgtggatttcaccgtggctggcggtgcctgccatg
gtagggattgtgttagtggtggtgtttacgctgcttgcccaagacaaaatgcaggagatg
gttgagcttacacagcgcgcatcagctcagcgcaatgccaccttggttgaaggcttggtg
gggattgaaacaattaaggtgatgggggcagaaagtgagtttcagcgccgctgggagcgt
tcaacgcattttctggcgcaagtaggctcaaaacttaaattgctttcatcaaccacggtt
aactttgcttcgctgattagccagttggtgagcgtagtggtgattattgtgggggtgtat
ttactcaccgaaaatatggtgacgatgggggggattatcgccgcttctatgttgtcgggt
cgggccttagcgccgcttgggcaagtggcgggtttgctaatgcagtaccaaaatgcacgc
acttccctggctggtattgaatcgcatatgaagttgccggttgagcggccggcagacagt
aatttcttgcaccgtgaatcgttccggggggatatcgagtttaaaaatgtcagctttggt
tatgccggtagcgatgaaaaagtacttaataatgtgtcgtttaaattaaaagccggtgaa
aaaatggccattattggccggattggttcgggtaaaactacgatagaaaaactgattctt
ggcctttattaccctacagaaggcgccgtgctgattgatggtgtggacacccggcaaatc
gatccggcagagctgcgtcgtgccatcggccatgtgccgcaagagcccatcttgttttac
ggcactttgcgccagaatattgcgatgggtgcaccgtttgcagatgatgccagtattttg
gccgctgctgagctggccggggtgaaggagttttcagatctgcacccgcgtggctttgat
atgctgattgccgagcggggagactccttatcgggcgggcagcggcaaacggtttctatt
gctcgtgccatgttgaatgatccaccgatgttgttgcttgatgagccaaccagtgccatg
gatcatttgtctgaagaaaaactaaaagcgcgcttaaaagcatatgtgatgcaaaaaaca
ctgctactggtgacgcaccgtacctcgctgcttgatttagtcgatcgtttgattgtgtta
gaccaaggccaggtggtggcagatgggcctaaggcacaggtgattgaggcgttgcagcag
ggcagaataggtaggaccagctga
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