Janthinobacterium sp. B9-8: VN23_18715 Help Entry VN23_18715        CDS       T04271                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism jab  Janthinobacterium sp. B9-8 Pathway jab02020   Two-component system jab02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:jab00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     VN23_18715  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     VN23_18715  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:jab03021]     VN23_18715 Transcription machinery [BR:jab03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      VN23_18715 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 GGA_N-GAT HTH_IclR Motif Other DBs NCBI-ProteinID:  AMC36472 LinkDB All DBs Position 4147139..4148512 Genome browser AA seq 457 aa AA seqDB search MKQTLQLRLSQQLNLTPQLQQAIKLLQLSTLEFQQELEQYLSENPLLERGEEAAAGEAEQ AEPQWEMGEDDGLRWEGTSHGSSDDDDDFDPASNIARDLDLREYLLQQAGLLPLSHRDKS LLLMLIEALDEDGFLSQSLEDVFSQLPEELIQDYELELDDLRIALIRLQHLEPLGIGARD TADCLCLQLRQKPVSAARDLALQIAENSLDLLAGRDYTRLKRAFKCEDAELKAAQELIVS LNPRPSAQWSVASPRYVSPDVVVQKVRGVWRVRLHDASMPKLRVNRLYADILQKGDGGHL ARELQEARWLVKSVQQRFDTILRVATAIVERQRAFFEHGEVAMRPLVLRDIAEELDLHES TISRVTTQKYMLTPRGLYEFKFFFGSHVDTDAGGECSATAIKALIKQMVQQEDKKKPLSD SVLAEALSAQGIVVARRTVAKYREALQIYPVSQRKSL NT seq 1374 nt NT seq  +upstreamnt  +downstreamnt atgaaacaaaccctgcagctgcggttatcccagcaacttaatcttactcctcagttgcag caggctatcaagctgctgcagctttccactcttgagtttcaacaagagcttgaacagtat ctgagcgaaaacccgttattggagcgtggcgaagaagccgctgctggcgaggcagagcaa gcagagccgcagtgggaaatgggtgaagacgatggtttacgctgggaaggcacaagccac gggagctcggatgatgacgatgattttgatccggccagcaatatcgcccgcgatttagat ttacgcgaatacttgctgcagcaagcaggtttgctgcctttgtcgcatcgggataagtcc ttgttattgatgctgattgaggcattggatgaagatgggtttctttctcaatccttagaa gatgtcttttctcagctgccagaggaacttatccaagattatgaactcgaacttgatgac ttaagaattgctttaattcgcttacagcatttagagcctttgggaattggagcaagagat accgctgattgtttatgcttacaattgcgccagaagccagtgagcgccgcccgtgattta gccttgcagattgccgaaaattcactcgatttattagctggccgggactacactaggctt aaacgggcttttaaatgcgaggatgctgagttaaaagcagcgcaagaattgattgtaagt ttaaaccctaggccaagcgcacaatggtctgtagcatcgcctagatatgtaagccctgat gtcgttgtacaaaaagtacgcggtgtttggcgggttagattacacgatgcttcgatgcct aaattgcgcgtgaatcgcctttatgcagatatcttacaaaaaggcgatggcggccattta gcgcgagagttacaagaagcacgttggttagtaaaaagtgtgcagcagcgatttgatacc attttgcgagtagccacagcgattgtagaacggcagcgcgcattttttgaacacggtgaa gtggcgatgcgcccgctagtgctcagagatatcgccgaagagctagatttacatgagtcg actatttctagggtaaccacgcaaaaatatatgcttacgccgcgtggcctatatgaattt aagtttttcttcggtagccatgttgatacggatgccggaggagagtgttctgctacagcg atcaaagcattgatcaagcagatggtgcagcaagaagataagaaaaaacctttaagtgat agcgtattggcagaagcattatccgctcaaggtattgtggtagcccggcgcaccgttgcc aaataccgtgaagcgttgcagatttacccagtaagtcagcgcaaaagtttgtaa

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