Janthinobacterium sp. B9-8: VN23_18915
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Entry
VN23_18915 CDS
T04271
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VN23_18915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jab02000
]
VN23_18915
Transporters [BR:
jab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VN23_18915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
nSTAND3
RsgA_GTPase
AAA_29
ORC-CDC6-like
cobW
MMR_HSR1
T2SSE
AAA_14
AAA_21
TsaE
AAA_33
Rad17
AAA_30
DUF87
DUF815
NACHT
Zeta_toxin
DUF6231
AAA_25
ATP-synt_ab
AAA_7
AAA_18
TrwB_AAD_bind
AAA
P-loop_TraG
Mg_chelatase
AAA_23
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
AMC36509
UniProt:
A0A109RWC4
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All DBs
Position
complement(4181731..4183470)
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AA seq
579 aa
AA seq
DB search
MTLFKLLGDFVRRHWRAYILAALMLFAVAVLTVWIPRQVGQMIDGLVNKSLTPDLLLWQL
AGLVAMGLSIYFLRVGWRLQLFTAAYRLGIELRVQLYQKLAAQGPAFYHRQRTGDLMARG
TNDIDAVEMAAGEAMLAGFDGSMTLILVLAMMTLGIDWRLAAVALLPFPLMALGFWRLSR
QVHQASTDSLERFSALNDHVQETLAGVRTLRALGLEGRNSKVLSGLAENAAKASLDAQRW
EAAFEPVVGMTLTAASVLTLSLGGYLVWHNQLTIGELTSFSMYLGQLIWPMFAAGWVLSL
LERGKAAWARLDPLLSQPLSVDDHGAVETAPSGLLNFDAIEFTYPEQNNAALAGISLSLA
AGQTLALVGPTGSGKSTLLRMLLRQYHPQSGAVRWNGVNVEDYKLQQLRSAMSWVPQESF
LFSASVAENIALIKPDATPAEIEHVAKLAAVHDDILRLPQGYETPVGEKGVSLSGGQRQR
VAIARALLSDAPLLLLDDALSAVDTQTETQILNHLRDAKQGRSMIIVSHRLSAVVDANHI
AVLKHGKVVESGTHQELVDLGGWYASQWRYQQLEASLEE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgtttaaactattgggcgattttgtccgccgccattggcgtgcctatattttg
gctgcgctcatgctctttgccgtggccgtgctaacggtatggattccacgccaagtgggc
cagatgattgatggcttggtcaataaatcgctgacgcctgatttactgctctggcaactg
gcgggactcgttgccatggggctaagcatctactttttgcgcgtaggctggcgcttgcag
ctgtttacggctgcttatcgcctagggattgagctaagggtacagctttaccaaaagctc
gccgcccaaggcccggccttttatcatcgccaacgcaccggcgatttgatggcgcgtggt
accaatgatatcgacgcggtagaaatggccgcaggcgaagccatgctggccggttttgat
ggctcgatgacgctgatcctcgtgctagccatgatgacgcttggcatagattggcgctta
gctgccgttgccctgctgcctttcccgctgatggcgctcggcttctggcgactatcgcgc
caagtgcatcaggcctctaccgattcgctggagcgcttttcagcgctcaacgatcatgtg
caggaaacactggctggcgtgcgcacacttcgcgctttgggcttagaaggcagaaatagc
aaggtgctatctggccttgccgaaaacgcagccaaagccagcctcgatgcacagcgctgg
gaggccgcatttgagccggtcgttggcatgacgctgaccgcggccagcgtattaacgctg
tctttaggtggctatctggtttggcataatcagctgaccattggtgagctaaccagtttc
agcatgtatctgggccagctaatctggccgatgtttgcagcgggctgggtgctctccctg
ctagaacgcggtaaagcagcgtgggcgcgacttgatccgctgctcagccagccactctcc
gtagacgatcatggagcagttgaaacggcaccaagcggcttactaaattttgacgcgatt
gagtttacttatccagagcaaaacaatgccgcactggcgggcatttcgctcagccttgct
gctgggcaaacgctggccttggttggcccgacaggatcgggtaaatcgacactgctgcgt
atgctactgcgccaataccacccgcaaagcggcgcggtgcgctggaacggcgtgaatgtg
gaagactataaattgcagcaactgcgctctgcgatgagctgggtgccacaggagtcattt
ttattctcggcatcggtcgcagaaaatattgccctgattaagccagatgccacacccgcc
gagattgagcacgtcgccaagctggcagcggtgcacgacgatattttgcgtctaccgcag
ggctatgaaacaccggttggtgagaaaggcgtatcgctttctggcggacaacgccaacgc
gtcgccatcgcccgcgccctgctgtctgacgctccactgctgctgctcgacgacgcgctg
tcggcggtggatacgcaaactgaaacgcaaattctgaatcacctaagagacgccaagcag
ggacgcagcatgattatcgtcagccaccgcctctctgccgtggtagacgccaaccatatt
gcggtactgaaacacggcaaggtggtagaaagcggcacgcatcaggaactagtcgaccta
ggcggctggtacgccagccagtggcgctaccaacagctggaagcaagcttggaagagtga
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